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Series GSE150590 Query DataSets for GSE150590
Status Public on May 15, 2020
Title Chromatin accessibility analysis of induced trophoblast stem cells.
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We report chromatin accessibility time-course profiling (ATAC-seq) of induced trophoblast stem cells (iTSCs) derived directly from human fibroblasts and naïve reprogramming intermediates.
 
Overall design ATAC-seq of iTSCs
 
Contributor(s) Liu X, Tan JP, Rossello FJ, Polo JM
Citation(s) 32939092
Submission date May 14, 2020
Last update date Sep 30, 2020
Contact name Fernando Rossello
E-mail(s) frossello@unimelb.edu.au, fernando.rossello@monash.edu
Phone +61 3 85598749
Organization name The University of Melbourne
Street address L 10, 305 Grattan Street
City Melbourne
State/province VIC
ZIP/Postal code 3000
Country Australia
 
Platforms (1)
GPL21697 NextSeq 550 (Homo sapiens)
Samples (4)
GSM4552868 ATAC_D8_iTSC_rep_1
GSM4552869 ATAC_D8_iTSC_rep_2
GSM4552870 ATAC_D21N_iTSC_rep_1
Relations
BioProject PRJNA632913
SRA SRP261682

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE150590_RAW.tar 1.1 Gb (http)(custom) TAR (of BW, NARROWPEAK)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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