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Status |
Public on Aug 07, 2020 |
Title |
HA-TFE3 bound regions in HK-2 HA-TFE3-inducible cells |
Organism |
Homo sapiens |
Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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Summary |
TFE3 is a bHLH-ZIP transcription factor, which nuclear localization is regulated by a tumor suppressor FLCN. In order to analyze TFE3 occupancy in whole genome, we have generated and utilized a HK-2 HA-TFE3-inducible cell line which express HA-tagged TFE3 in a doxycycline-dependent manner. HA-TFE3 bound regions were determined by ChIPSeq.
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Overall design |
We performed ChIP-seq analysis in duplicate with an antibody against HA-tag on a HK-2 HA-TFE3-inducible cell line.
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Contributor(s) |
Baba M, Satou Y, Kubota Y |
Citation missing |
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Submission date |
Aug 07, 2019 |
Last update date |
Aug 10, 2020 |
Contact name |
Masaya Baba |
Organization name |
Kumamoto University
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Department |
Urology
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Street address |
1-1-1 Honjo, Chuo-ku
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City |
Kumamoto |
State/province |
Kumamoto |
ZIP/Postal code |
860-8556 |
Country |
Japan |
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Platforms (1) |
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Samples (3) |
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Relations |
BioProject |
PRJNA559085 |
SRA |
SRP217680 |