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Links from GEO DataSets

Items: 20

1.

Uterine Gene Profile of Estriol, a Weak Estrogen

(Submitter supplied) Females were ovariectomized and injected with saline estradiol or estriol. Uterine tissue was collected after 2 or 24 hours. RNA was analyzed by microarray compare ealry and late responses to a potent and a weak estrogen agaonist.
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL4134
15 Samples
Download data: TIFF, TXT
Series
Accession:
GSE23241
ID:
200023241
2.

Potential mechanisms of endocrine disruptors as revealed by uterine gene profile

(Submitter supplied) Females were ovariectomized and injected with sesame oil, estradiol in sesame oil, BPA in sesame oil or HPTE in sesame oil. Uterine tissue was collected after 2 or 24 hours. RNA was analyzed by microarray compare ealry and late responses to a potent and a weak estrogen agaonist.
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL4134
20 Samples
Download data: TIFF, TXT
Series
Accession:
GSE24525
ID:
200024525
3.

Uterine gene profiles from WT, KIKO (DNA-binding deficient ERα) and aERKO mice treated with estradiol or xenoestrogens

(Submitter supplied) Ovariectomized WT, KIKO (DNA-binding deficient ERα) or αERKO female mice were injected (ip) with saline (vehicle), estradiol (E2; 250 ng), bisphenol A (BPA; 750 µg) or 2,2-bis(p-hydroxyphenyl)-1,1,1-trichloroethane (HPTE; 750 µg) and uteri were collected after 2 or 24 hours. Uterine profiles were compared and indicated the early (2 hour) responses to E2 were highly correlated to the BPA and HPTE profiles. more...
Organism:
Mus musculus
Type:
Expression profiling by array
Platforms:
GPL4134 GPL7202
36 Samples
Download data: TIFF, TXT
Series
Accession:
GSE18168
ID:
200018168
4.

Estren Behaves as a Weak Estrogen Rather than a Non-genomic Selective Activator in the Mouse Uterus

(Submitter supplied) A proposed membrane-mediated mechanism of rapid non genomic response to estrogen has been the intense focus of recent research. Estren (Es), a synthetic steroid, is reported to act selectively through a rapid membrane-mediated pathway, rather than through the classical nuclear estrogen receptor (ER)-mediated pathway, to maintain bone density in ovaierectomized mice without uterotropic effects. To further evaluate the mechanism and physiological effects of Es we studied responses in adult ovariectomized mice. more...
Organism:
Mus musculus
Type:
Expression profiling by array
Datasets:
GDS2077 GDS2078
Platform:
GPL891
22 Samples
Download data: TIFF, TXT
Series
Accession:
GSE4615
ID:
200004615
5.
Full record GDS2078

Estren effect on the estrogen receptor alpha null uterus: time course

Analysis of uteri from adult ovariectomized estrogen receptor alpha (ERalpha) null mutants treated with estren, estradiol, or 19-nortestosterone for 2 or 24 hours. Estren is a synthetic steroid. Results provide insight into the dependence of gene responses induced by estren in the uterus on ERalpha.
Organism:
Mus musculus
Type:
Expression profiling by array, log10 ratio, 3 agent, 2 time sets
Platform:
GPL891
Series:
GSE4615
10 Samples
Download data: TIFF, TXT
DataSet
Accession:
GDS2078
ID:
2078
6.
Full record GDS2077

Estren effect on the uterus: time course

Analysis of uteri from adult ovariectomized animals treated with estren, estradiol, dihydrotestosterone, or 19-nortestosterone for 2 or 24 hours. Estren is a synthetic steroid. Results provide insight into the molecular and physiological effects of estren on the uterus.
Organism:
Mus musculus
Type:
Expression profiling by array, log10 ratio, 4 agent, 2 time sets
Platform:
GPL891
Series:
GSE4615
12 Samples
Download data: TIFF, TXT
DataSet
Accession:
GDS2077
ID:
2077
7.

ERa and PolII ChIP seq from KIKO mouse uterus

(Submitter supplied) ChIP-seq from mice with DNA binding mutations in Esr1 (KIKO mouse). Estrogen Receptor α (ERα) interacts with DNA, directly, or indirectly via other transcription factors, referred to as “tethering”. Evidence for tethering is based on in vitro studies and a widely used “KIKO” mouse model containing mutations that prevent direct estrogen response element (ERE) DNA-binding. KIKO mice are infertile, due in part to the inability of estrogen (E2) to induce uterine epithelial proliferation. more...
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL11002
5 Samples
Download data: BED, BEDGRAPH
Series
Accession:
GSE56466
ID:
200056466
8.

Estradiol Induced Transcriptional Profile of EAAE DNA Binding Deficient ERa Uterus

(Submitter supplied) To evaluate the ability of a DNA binding deficient ERa to mediate transcriptional responses in the mouse uterus, ovariectomized mice were injected with 100 ul of saline or 250 ng of estradiol (E2) in 100 ul saline, uterine tissue was collected 2 hours filllowing the injection, and RNA was isolated
Organism:
Mus musculus
Type:
Expression profiling by array
Dataset:
GDS5664
Platform:
GPL4134
12 Samples
Download data: TXT
Series
Accession:
GSE56423
ID:
200056423
9.
Full record GDS5664

Estradiol effect on uterus of EAAE estrogen receptor α DNA-binding-deficient model

Analysis of uteri from ovariectomized, EAAE ERα DNA-binding domain mutants collected 2hrs after estradiol injection. The EAAE mouse has an ERα null-like female reproductive tract phenotype. Results provide insight into the ability of EAAE ERα to mediate transcriptional responses in the uterus.
Organism:
Mus musculus
Type:
Expression profiling by array, count, 2 agent, 2 genotype/variation sets
Platform:
GPL4134
Series:
GSE56423
12 Samples
Download data: TXT
10.

Uterine Epithelial Cells Specific Estrogen Receptor alpha-Dependent Gene Expression Profiles in Response to Estrogen

(Submitter supplied) Estrogens stimulate hypertrophy and hyperplasia in the uterus and exert their activity through estrogen receptor α (ERα). A uterine epithelial ERα conditional knockout mouse model (Wnt7aCre+;Esr1f/f or cKO) demonstrated that ERα in the epithelial cells was dispensable for an early uterine proliferative response to 17β-estradiol (E2), but required for subsequent uterine biological responses. We compared the gene expression profile in the uterus after E2 treatment in the cKO samples with WT samples. more...
Organism:
Mus musculus
Type:
Expression profiling by array
Dataset:
GDS5461
Platform:
GPL4134
18 Samples
Download data: TXT
Series
Accession:
GSE53812
ID:
200053812
11.

Estrogen response uterine gene profile in Ex3αERKO

(Submitter supplied) WT and Ex3aERKO females were ovariectomized and injected with saline or estradiol. Uterine tissue was collected after 2 or 24 hours. RNA was analyzed by microarray to determine if the Ex3aERKO mice would lack the residual transcritpional resposnes seen in the previous aERKO model.
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL4134
18 Samples
Download data: TIFF, TXT
Series
Accession:
GSE23072
ID:
200023072
12.
Full record GDS5461

17β-estradiol effect on uterus of uterine epithelial ERα conditional knockout model: time course

Analysis of uteri from ovariectomized adult females with uterine epithelial cell-specific ERα deletion following treatment with 17β-estradiol for 2 or 24 hrs. Results provide insight into cell specific actions of ERα in the female reproductive tract.
Organism:
Mus musculus
Type:
Expression profiling by array, count, 2 agent, 2 genotype/variation, 2 time sets
Platform:
GPL4134
Series:
GSE53812
18 Samples
Download data: TXT
13.

24 hour time course: regulation of uterine genes by estradiol in ovariectomized mice

(Submitter supplied) Using microarray technology, we compared the global expression pattern of uterine RNA from ovariectomized control mice to those of ovariectomized mice treated with estradiol for various intervals between 30 minutes and 24 hours. Keywords: estrogen, uterus, genomic, mouse
Organism:
Mus musculus
Type:
Expression profiling by array
Dataset:
GDS2208
Platform:
GPL891
10 Samples
Download data: TIFF, TXT
Series
Accession:
GSE4664
ID:
200004664
14.
Full record GDS2208

Estradiol effect on the uterus: time course

Expression profiling of uteri from ovariectomized C57BL/6 animals at various time points up to 24 hours following treatment with estradiol (E2). E2 plays a critical role in regulating the growth, differentiation, and secretory function of the uterus.
Organism:
Mus musculus
Type:
Expression profiling by array, log10 ratio, 5 time sets
Platform:
GPL891
Series:
GSE4664
10 Samples
Download data: TIFF, TXT
DataSet
Accession:
GDS2208
ID:
2208
15.

Preferential Epigenetic Programming of Estrogen Response after in utero xenoestrogen (bisphenol-A) exposure

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Expression profiling by array; Methylation profiling by genome tiling array
Platforms:
GPL18163 GPL6887
14 Samples
Download data: GFF, PAIR
Series
Accession:
GSE89131
ID:
200089131
16.

Preferential Epigenetic Programming of Estrogen Response after in utero xenoestrogen (bisphenol-A) exposure [NimbleGen]

(Submitter supplied) Bisphenol-A (BPA) is an environmentally ubiquitous estrogen-like endocrine-disrupting compound. Exposure toBPAin utero hasbeen linked tofemale reproductive disorders, including endometrial hyperplasiaandbreast cancer. Estrogens are an etiological factor in many of these conditions. We sought to determine whether in utero exposure to BPA altered the globalCpGmethylation pattern of the uterine genome, subsequent gene expression, and estrogen response.Pregnantmicewere exposed to an environmentally relevant dose of BPAorDMSOcontrol.Uterine DNAand RNAwere examined by usingmethylatedDNAimmunoprecipitationmethylation microarray, expression microarray, and quantitative PCR. more...
Organism:
Mus musculus
Type:
Methylation profiling by genome tiling array
Platform:
GPL18163
4 Samples
Download data: GFF, PAIR
Series
Accession:
GSE89125
ID:
200089125
17.

Preferential Epigenetic Programming of Estrogen Response after in utero xenoestrogen (bisphenol-A) exposure [Illumina]

(Submitter supplied) Bisphenol-A (BPA) is an environmentally ubiquitous estrogen-like endocrine-disrupting compound. Exposure toBPAin utero hasbeen linked to female reproductive disorders, including endometrial hyperplasia and breast cancer. Estrogens are an etiological factor in many of these conditions. We sought to determine whether in utero exposure to BPA altered the global CpG methylation pattern of the uterine genome, subsequent gene expression, and estrogen response. more...
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL6887
10 Samples
Download data: TXT
Series
Accession:
GSE86923
ID:
200086923
18.

Peri- and post-pubertal estrogen exposures of female mice optimize uterine responses later in life

(Submitter supplied) At birth, all female mice, including those that either lack estrogen receptor α (ERα-knockout) or that express mutated forms of ERα (AF2ERKI), have a hypoplastic uterus. However, uterine growth and development that normally accompanies pubertal maturation does not occur in ERα-knockout or AF2ERKI mice, indicating ERα mediated estrogen signaling is essential for this process. Mice that lack Cyp19 (aromatase, ArKO mice), an enzyme critical for estrogen (E2) synthesis, are unable to make E2, and lack pubertal uterine development. more...
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL21877
12 Samples
Download data: CEL, CHP
Series
Accession:
GSE147900
ID:
200147900
19.

A distal super enhancer mediates estrogen-dependent mouse uterine–specific gene transcription of Insulin-like growth factor 1 (Igf1)

(Submitter supplied) Insulin-like growth factor 1 (IGF1) is primarily synthesized in and secreted from the liver; however, estrogen (E2), through E2 receptor α (ERα), increases uterine Igf1 mRNA levels. Previous ChIP-Seq analyses of the murine uterus have revealed a potential enhancer region distal from the Igf1 transcription start site (TSS) with multiple E2-dependent ERα-binding regions. Here, we show E2-dependent super enhancer–associated characteristics and suggest contact between the distal enhancer and the Igf1 TSS. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other
5 related Platforms
38 Samples
Download data: BIGWIG, HIC, TXT
Series
Accession:
GSE125972
ID:
200125972
20.

Effects of plasticizers (bisphenol A, bisphenol AF) and an herbicide in MCF7 human breast cancer cells

(Submitter supplied) We studied alterations in gene expression profiles of the MCF7 human breast cancer cells caused by bisphenol A, bisphenol AF and glyphosate using Illumina RNA sequencing platform.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL16791
15 Samples
Download data: TXT
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