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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs2228145

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr1:154454494 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
A>C / A>T
Variation Type
SNV Single Nucleotide Variation
Frequency
C=0.334818 (88623/264690, TOPMED)
C=0.379170 (94659/249648, GnomAD_exome)
C=0.392909 (92604/235688, ALFA) (+ 22 more)
C=0.317319 (44240/139418, GnomAD)
C=0.375617 (44253/117814, ExAC)
C=0.32025 (25204/78700, PAGE_STUDY)
C=0.38176 (10787/28256, 14KJPN)
C=0.38043 (6376/16760, 8.3KJPN)
C=0.2914 (1866/6404, 1000G_30x)
C=0.2931 (1468/5008, 1000G)
C=0.3377 (1513/4480, Estonian)
C=0.4253 (1639/3854, ALSPAC)
C=0.4237 (1571/3708, TWINSUK)
C=0.4307 (1262/2930, KOREAN)
C=0.2577 (487/1890, HapMap)
C=0.4252 (779/1832, Korea1K)
C=0.416 (415/998, GoNL)
C=0.411 (322/784, PRJEB37584)
C=0.337 (202/600, NorthernSweden)
C=0.406 (217/534, MGP)
A=0.367 (116/316, SGDP_PRJ)
C=0.296 (90/304, FINRISK)
C=0.338 (73/216, Qatari)
C=0.40 (16/40, GENOME_DK)
A=0.43 (12/28, Siberian)
Clinical Significance
Reported in ClinVar
Gene : Consequence
IL6R : Missense Variant
Publications
137 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315
Population Group Sample Size Ref Allele Alt Allele Ref HMOZ Alt HMOZ HTRZ HWEP
Total Global 252824 A=0.612118 C=0.387882 0.37975 0.155515 0.464734 31
European Sub 207880 A=0.604137 C=0.395863 0.365884 0.15761 0.476506 1
African Sub 10614 A=0.85350 C=0.14650 0.735444 0.028453 0.236103 9
African Others Sub 378 A=0.913 C=0.087 0.830688 0.005291 0.164021 0
African American Sub 10236 A=0.85131 C=0.14869 0.731927 0.029308 0.238765 9
Asian Sub 6674 A=0.5920 C=0.4080 0.351513 0.167516 0.480971 0
East Asian Sub 4790 A=0.5689 C=0.4311 0.322756 0.184969 0.492276 0
Other Asian Sub 1884 A=0.6507 C=0.3493 0.424628 0.123142 0.452229 0
Latin American 1 Sub 886 A=0.642 C=0.358 0.408578 0.124153 0.467269 0
Latin American 2 Sub 5288 A=0.4435 C=0.5565 0.198185 0.311271 0.490545 0
South Asian Sub 330 A=0.700 C=0.300 0.490909 0.090909 0.418182 0
Other Sub 21152 A=0.61531 C=0.38469 0.388899 0.158283 0.452818 11


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 A=0.665182 C=0.334818
gnomAD - Exomes Global Study-wide 249648 A=0.620830 C=0.379170
gnomAD - Exomes European Sub 134226 A=0.621146 C=0.378854
gnomAD - Exomes Asian Sub 48756 A=0.66540 C=0.33460
gnomAD - Exomes American Sub 34318 A=0.44973 C=0.55027
gnomAD - Exomes African Sub 16194 A=0.87057 C=0.12943
gnomAD - Exomes Ashkenazi Jewish Sub 10044 A=0.58781 C=0.41219
gnomAD - Exomes Other Sub 6110 A=0.6116 C=0.3884
Allele Frequency Aggregator Total Global 235688 A=0.607091 C=0.392909
Allele Frequency Aggregator European Sub 196994 A=0.604089 C=0.395911
Allele Frequency Aggregator Other Sub 19684 A=0.61385 C=0.38615
Allele Frequency Aggregator Asian Sub 6674 A=0.5920 C=0.4080
Allele Frequency Aggregator African Sub 5832 A=0.8407 C=0.1593
Allele Frequency Aggregator Latin American 2 Sub 5288 A=0.4435 C=0.5565
Allele Frequency Aggregator Latin American 1 Sub 886 A=0.642 C=0.358
Allele Frequency Aggregator South Asian Sub 330 A=0.700 C=0.300
gnomAD - Genomes Global Study-wide 139418 A=0.682681 C=0.317319
gnomAD - Genomes European Sub 75648 A=0.62166 C=0.37834
gnomAD - Genomes African Sub 41680 A=0.86252 C=0.13748
gnomAD - Genomes American Sub 13546 A=0.50775 C=0.49225
gnomAD - Genomes Ashkenazi Jewish Sub 3320 A=0.5913 C=0.4087
gnomAD - Genomes East Asian Sub 3088 A=0.6305 C=0.3695
gnomAD - Genomes Other Sub 2136 A=0.6615 C=0.3385
ExAC Global Study-wide 117814 A=0.624383 C=0.375617
ExAC Europe Sub 71288 A=0.60772 C=0.39228
ExAC Asian Sub 24346 A=0.66101 C=0.33899
ExAC American Sub 11170 A=0.43232 C=0.56768
ExAC African Sub 10132 A=0.86627 C=0.13373
ExAC Other Sub 878 A=0.614 C=0.386
The PAGE Study Global Study-wide 78700 A=0.67975 C=0.32025
The PAGE Study AfricanAmerican Sub 32516 A=0.85198 C=0.14802
The PAGE Study Mexican Sub 10810 A=0.47928 C=0.52072
The PAGE Study Asian Sub 8318 A=0.5995 C=0.4005
The PAGE Study PuertoRican Sub 7918 A=0.6096 C=0.3904
The PAGE Study NativeHawaiian Sub 4534 A=0.4343 C=0.5657
The PAGE Study Cuban Sub 4228 A=0.6213 C=0.3787
The PAGE Study Dominican Sub 3828 A=0.7247 C=0.2753
The PAGE Study CentralAmerican Sub 2450 A=0.4849 C=0.5151
The PAGE Study SouthAmerican Sub 1982 A=0.4571 C=0.5429
The PAGE Study NativeAmerican Sub 1260 A=0.5762 C=0.4238
The PAGE Study SouthAsian Sub 856 A=0.710 C=0.290
14KJPN JAPANESE Study-wide 28256 A=0.61824 C=0.38176
8.3KJPN JAPANESE Study-wide 16760 A=0.61957 C=0.38043
1000Genomes_30x Global Study-wide 6404 A=0.7086 C=0.2914
1000Genomes_30x African Sub 1786 A=0.9110 C=0.0890
1000Genomes_30x Europe Sub 1266 A=0.6374 C=0.3626
1000Genomes_30x South Asian Sub 1202 A=0.7063 C=0.2937
1000Genomes_30x East Asian Sub 1170 A=0.6744 C=0.3256
1000Genomes_30x American Sub 980 A=0.476 C=0.524
1000Genomes Global Study-wide 5008 A=0.7069 C=0.2931
1000Genomes African Sub 1322 A=0.9130 C=0.0870
1000Genomes East Asian Sub 1008 A=0.6766 C=0.3234
1000Genomes Europe Sub 1006 A=0.6402 C=0.3598
1000Genomes South Asian Sub 978 A=0.700 C=0.300
1000Genomes American Sub 694 A=0.464 C=0.536
Genetic variation in the Estonian population Estonian Study-wide 4480 A=0.6623 C=0.3377
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 A=0.5747 C=0.4253
UK 10K study - Twins TWIN COHORT Study-wide 3708 A=0.5763 C=0.4237
KOREAN population from KRGDB KOREAN Study-wide 2930 A=0.5693 C=0.4307
HapMap Global Study-wide 1890 A=0.7423 C=0.2577
HapMap American Sub 770 A=0.657 C=0.343
HapMap African Sub 692 A=0.912 C=0.088
HapMap Asian Sub 252 A=0.627 C=0.373
HapMap Europe Sub 176 A=0.614 C=0.386
Korean Genome Project KOREAN Study-wide 1832 A=0.5748 C=0.4252
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 A=0.584 C=0.416
CNV burdens in cranial meningiomas Global Study-wide 784 A=0.589 C=0.411
CNV burdens in cranial meningiomas CRM Sub 784 A=0.589 C=0.411
Northern Sweden ACPOP Study-wide 600 A=0.663 C=0.337
Medical Genome Project healthy controls from Spanish population Spanish controls Study-wide 534 A=0.594 C=0.406
SGDP_PRJ Global Study-wide 316 A=0.367 C=0.633
FINRISK Finnish from FINRISK project Study-wide 304 A=0.704 C=0.296
Qatari Global Study-wide 216 A=0.662 C=0.338
The Danish reference pan genome Danish Study-wide 40 A=0.60 C=0.40
Siberian Global Study-wide 28 A=0.43 C=0.57
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 1 NC_000001.11:g.154454494A>C
GRCh38.p14 chr 1 NC_000001.11:g.154454494A>T
GRCh37.p13 chr 1 NC_000001.10:g.154426970A>C
GRCh37.p13 chr 1 NC_000001.10:g.154426970A>T
IL6R RefSeqGene NG_012087.1:g.54302A>C
IL6R RefSeqGene NG_012087.1:g.54302A>T
Gene: IL6R, interleukin 6 receptor (plus strand)
Molecule type Change Amino acid[Codon] SO Term
IL6R transcript variant 8 NM_001382773.1:c.1114+451…

NM_001382773.1:c.1114+4514A>C

N/A Intron Variant
IL6R transcript variant 2 NM_181359.3:c.1066+4514A>C N/A Intron Variant
IL6R transcript variant 3 NM_001206866.2:c. N/A Genic Downstream Transcript Variant
IL6R transcript variant 1 NM_000565.4:c.1073A>C D [GAT] > A [GCT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform 1 precursor NP_000556.1:p.Asp358Ala D (Asp) > A (Ala) Missense Variant
IL6R transcript variant 1 NM_000565.4:c.1073A>T D [GAT] > V [GTT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform 1 precursor NP_000556.1:p.Asp358Val D (Asp) > V (Val) Missense Variant
IL6R transcript variant 7 NM_001382772.1:c.1067A>C D [GAT] > A [GCT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform 7 precursor NP_001369701.1:p.Asp356Ala D (Asp) > A (Ala) Missense Variant
IL6R transcript variant 7 NM_001382772.1:c.1067A>T D [GAT] > V [GTT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform 7 precursor NP_001369701.1:p.Asp356Val D (Asp) > V (Val) Missense Variant
IL6R transcript variant 6 NM_001382771.1:c.1121A>C D [GAT] > A [GCT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform 6 precursor NP_001369700.1:p.Asp374Ala D (Asp) > A (Ala) Missense Variant
IL6R transcript variant 6 NM_001382771.1:c.1121A>T D [GAT] > V [GTT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform 6 precursor NP_001369700.1:p.Asp374Val D (Asp) > V (Val) Missense Variant
IL6R transcript variant 4 NM_001382769.1:c.1172A>C D [GAT] > A [GCT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform 4 precursor NP_001369698.1:p.Asp391Ala D (Asp) > A (Ala) Missense Variant
IL6R transcript variant 4 NM_001382769.1:c.1172A>T D [GAT] > V [GTT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform 4 precursor NP_001369698.1:p.Asp391Val D (Asp) > V (Val) Missense Variant
IL6R transcript variant 5 NM_001382770.1:c.1166A>C D [GAT] > A [GCT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform 5 precursor NP_001369699.1:p.Asp389Ala D (Asp) > A (Ala) Missense Variant
IL6R transcript variant 5 NM_001382770.1:c.1166A>T D [GAT] > V [GTT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform 5 precursor NP_001369699.1:p.Asp389Val D (Asp) > V (Val) Missense Variant
IL6R transcript variant 9 NM_001382774.1:c.713A>C D [GAT] > A [GCT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform 9 precursor NP_001369703.1:p.Asp238Ala D (Asp) > A (Ala) Missense Variant
IL6R transcript variant 9 NM_001382774.1:c.713A>T D [GAT] > V [GTT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform 9 precursor NP_001369703.1:p.Asp238Val D (Asp) > V (Val) Missense Variant
IL6R transcript variant X8 XM_005245139.2:c.924+4514…

XM_005245139.2:c.924+4514A>C

N/A Intron Variant
IL6R transcript variant X6 XM_047419655.1:c.972+4514…

XM_047419655.1:c.972+4514A>C

N/A Intron Variant
IL6R transcript variant X1 XM_017001199.2:c.1220A>C D [GAT] > A [GCT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform X1 XP_016856688.1:p.Asp407Ala D (Asp) > A (Ala) Missense Variant
IL6R transcript variant X1 XM_017001199.2:c.1220A>T D [GAT] > V [GTT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform X1 XP_016856688.1:p.Asp407Val D (Asp) > V (Val) Missense Variant
IL6R transcript variant X2 XM_047419648.1:c.1157A>C D [GAT] > A [GCT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform X2 XP_047275604.1:p.Asp386Ala D (Asp) > A (Ala) Missense Variant
IL6R transcript variant X2 XM_047419648.1:c.1157A>T D [GAT] > V [GTT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform X2 XP_047275604.1:p.Asp386Val D (Asp) > V (Val) Missense Variant
IL6R transcript variant X3 XM_047419649.1:c.1109A>C D [GAT] > A [GCT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform X3 XP_047275605.1:p.Asp370Ala D (Asp) > A (Ala) Missense Variant
IL6R transcript variant X3 XM_047419649.1:c.1109A>T D [GAT] > V [GTT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform X3 XP_047275605.1:p.Asp370Val D (Asp) > V (Val) Missense Variant
IL6R transcript variant X4 XM_047419650.1:c.1010A>C D [GAT] > A [GCT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform X4 XP_047275606.1:p.Asp337Ala D (Asp) > A (Ala) Missense Variant
IL6R transcript variant X4 XM_047419650.1:c.1010A>T D [GAT] > V [GTT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform X4 XP_047275606.1:p.Asp337Val D (Asp) > V (Val) Missense Variant
IL6R transcript variant X5 XM_047419654.1:c.1078A>C I [ATT] > L [CTT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform X5 XP_047275610.1:p.Ile360Leu I (Ile) > L (Leu) Missense Variant
IL6R transcript variant X5 XM_047419654.1:c.1078A>T I [ATT] > F [TTT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform X5 XP_047275610.1:p.Ile360Phe I (Ile) > F (Phe) Missense Variant
IL6R transcript variant X7 XM_047419656.1:c.1030A>C I [ATT] > L [CTT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform X7 XP_047275612.1:p.Ile344Leu I (Ile) > L (Leu) Missense Variant
IL6R transcript variant X7 XM_047419656.1:c.1030A>T I [ATT] > F [TTT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform X7 XP_047275612.1:p.Ile344Phe I (Ile) > F (Phe) Missense Variant
IL6R transcript variant X9 XM_047419657.1:c.979A>C I [ATT] > L [CTT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform X9 XP_047275613.1:p.Ile327Leu I (Ile) > L (Leu) Missense Variant
IL6R transcript variant X9 XM_047419657.1:c.979A>T I [ATT] > F [TTT] Coding Sequence Variant
interleukin-6 receptor subunit alpha isoform X9 XP_047275613.1:p.Ile327Phe I (Ile) > F (Phe) Missense Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Allele: C (allele ID: 29699 )
ClinVar Accession Disease Names Clinical Significance
RCV000015767.2 Soluble interleukin-6 receptor, serum level of, quantitative trait locus Association
RCV000029243.2 Interleukin 6, serum level of, quantitative trait locus Association
RCV001514924.4 not provided Benign
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement A= C T
GRCh38.p14 chr 1 NC_000001.11:g.154454494= NC_000001.11:g.154454494A>C NC_000001.11:g.154454494A>T
GRCh37.p13 chr 1 NC_000001.10:g.154426970= NC_000001.10:g.154426970A>C NC_000001.10:g.154426970A>T
IL6R RefSeqGene NG_012087.1:g.54302= NG_012087.1:g.54302A>C NG_012087.1:g.54302A>T
IL6R transcript variant 1 NM_000565.4:c.1073= NM_000565.4:c.1073A>C NM_000565.4:c.1073A>T
IL6R transcript variant 1 NM_000565.3:c.1073= NM_000565.3:c.1073A>C NM_000565.3:c.1073A>T
IL6R transcript variant 4 NM_001382769.1:c.1172= NM_001382769.1:c.1172A>C NM_001382769.1:c.1172A>T
IL6R transcript variant 5 NM_001382770.1:c.1166= NM_001382770.1:c.1166A>C NM_001382770.1:c.1166A>T
IL6R transcript variant 6 NM_001382771.1:c.1121= NM_001382771.1:c.1121A>C NM_001382771.1:c.1121A>T
IL6R transcript variant 7 NM_001382772.1:c.1067= NM_001382772.1:c.1067A>C NM_001382772.1:c.1067A>T
IL6R transcript variant 9 NM_001382774.1:c.713= NM_001382774.1:c.713A>C NM_001382774.1:c.713A>T
IL6R transcript variant X1 XM_017001199.2:c.1220= XM_017001199.2:c.1220A>C XM_017001199.2:c.1220A>T
IL6R transcript variant X1 XM_017001199.1:c.1220= XM_017001199.1:c.1220A>C XM_017001199.1:c.1220A>T
IL6R transcript variant X2 XM_047419648.1:c.1157= XM_047419648.1:c.1157A>C XM_047419648.1:c.1157A>T
IL6R transcript variant X3 XM_047419649.1:c.1109= XM_047419649.1:c.1109A>C XM_047419649.1:c.1109A>T
IL6R transcript variant X4 XM_047419650.1:c.1010= XM_047419650.1:c.1010A>C XM_047419650.1:c.1010A>T
IL6R transcript variant X5 XM_047419654.1:c.1078= XM_047419654.1:c.1078A>C XM_047419654.1:c.1078A>T
IL6R transcript variant X7 XM_047419656.1:c.1030= XM_047419656.1:c.1030A>C XM_047419656.1:c.1030A>T
IL6R transcript variant X9 XM_047419657.1:c.979= XM_047419657.1:c.979A>C XM_047419657.1:c.979A>T
interleukin-6 receptor subunit alpha isoform 1 precursor NP_000556.1:p.Asp358= NP_000556.1:p.Asp358Ala NP_000556.1:p.Asp358Val
interleukin-6 receptor subunit alpha isoform 4 precursor NP_001369698.1:p.Asp391= NP_001369698.1:p.Asp391Ala NP_001369698.1:p.Asp391Val
interleukin-6 receptor subunit alpha isoform 5 precursor NP_001369699.1:p.Asp389= NP_001369699.1:p.Asp389Ala NP_001369699.1:p.Asp389Val
interleukin-6 receptor subunit alpha isoform 6 precursor NP_001369700.1:p.Asp374= NP_001369700.1:p.Asp374Ala NP_001369700.1:p.Asp374Val
interleukin-6 receptor subunit alpha isoform 7 precursor NP_001369701.1:p.Asp356= NP_001369701.1:p.Asp356Ala NP_001369701.1:p.Asp356Val
interleukin-6 receptor subunit alpha isoform 9 precursor NP_001369703.1:p.Asp238= NP_001369703.1:p.Asp238Ala NP_001369703.1:p.Asp238Val
interleukin-6 receptor subunit alpha isoform X1 XP_016856688.1:p.Asp407= XP_016856688.1:p.Asp407Ala XP_016856688.1:p.Asp407Val
interleukin-6 receptor subunit alpha isoform X2 XP_047275604.1:p.Asp386= XP_047275604.1:p.Asp386Ala XP_047275604.1:p.Asp386Val
interleukin-6 receptor subunit alpha isoform X3 XP_047275605.1:p.Asp370= XP_047275605.1:p.Asp370Ala XP_047275605.1:p.Asp370Val
interleukin-6 receptor subunit alpha isoform X4 XP_047275606.1:p.Asp337= XP_047275606.1:p.Asp337Ala XP_047275606.1:p.Asp337Val
interleukin-6 receptor subunit alpha isoform X5 XP_047275610.1:p.Ile360= XP_047275610.1:p.Ile360Leu XP_047275610.1:p.Ile360Phe
interleukin-6 receptor subunit alpha isoform X7 XP_047275612.1:p.Ile344= XP_047275612.1:p.Ile344Leu XP_047275612.1:p.Ile344Phe
interleukin-6 receptor subunit alpha isoform X9 XP_047275613.1:p.Ile327= XP_047275613.1:p.Ile327Leu XP_047275613.1:p.Ile327Phe
IL6R transcript variant 8 NM_001382773.1:c.1114+4514= NM_001382773.1:c.1114+4514A>C NM_001382773.1:c.1114+4514A>T
IL6R transcript variant 2 NM_181359.2:c.1066+4514= NM_181359.2:c.1066+4514A>C NM_181359.2:c.1066+4514A>T
IL6R transcript variant 2 NM_181359.3:c.1066+4514= NM_181359.3:c.1066+4514A>C NM_181359.3:c.1066+4514A>T
IL6R transcript variant X6 XM_005245139.1:c.924+4514= XM_005245139.1:c.924+4514A>C XM_005245139.1:c.924+4514A>T
IL6R transcript variant X8 XM_005245139.2:c.924+4514= XM_005245139.2:c.924+4514A>C XM_005245139.2:c.924+4514A>T
IL6R transcript variant X6 XM_047419655.1:c.972+4514= XM_047419655.1:c.972+4514A>C XM_047419655.1:c.972+4514A>T
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

170 SubSNP, 25 Frequency, 3 ClinVar submissions
No Submitter Submission ID Date (Build)
1 HDSHIN ss12586468 Aug 27, 2003 (130)
2 WIPGA ss16338697 Feb 27, 2004 (130)
3 CSHL-HAPMAP ss16424581 Feb 27, 2004 (130)
4 ABI ss44044481 Mar 13, 2006 (130)
5 SNP500CANCER ss48295187 Mar 13, 2006 (130)
6 APPLERA_GI ss48414048 Mar 13, 2006 (130)
7 ILLUMINA ss65729818 Oct 16, 2006 (130)
8 PERLEGEN ss68780517 May 18, 2007 (130)
9 AFFY ss74811108 Aug 16, 2007 (130)
10 ILLUMINA ss74878395 Dec 07, 2007 (129)
11 HGSV ss81092025 Dec 14, 2007 (130)
12 BCMHGSC_JDW ss87824326 Mar 23, 2008 (129)
13 HUMANGENOME_JCVI ss99251101 Feb 04, 2009 (130)
14 BGI ss102785579 Dec 01, 2009 (131)
15 1000GENOMES ss108598621 Feb 13, 2009 (130)
16 ILLUMINA-UK ss119031748 Feb 15, 2009 (130)
17 KRIBB_YJKIM ss119586912 Dec 01, 2009 (131)
18 SEATTLESEQ ss159699006 Dec 01, 2009 (131)
19 ILLUMINA ss160954756 Dec 01, 2009 (131)
20 ENSEMBL ss161175954 Dec 01, 2009 (131)
21 COMPLETE_GENOMICS ss167132556 Jul 04, 2010 (132)
22 OMICIA ss169633700 Aug 28, 2012 (137)
23 ILLUMINA ss174737355 Jul 04, 2010 (132)
24 PAGE_STUDY ss181834220 Jul 04, 2010 (132)
25 PAGE_STUDY ss181836017 Jul 04, 2010 (132)
26 BUSHMAN ss199085348 Jul 04, 2010 (132)
27 BCM-HGSC-SUB ss205146825 Jul 04, 2010 (132)
28 1000GENOMES ss218650924 Jul 14, 2010 (132)
29 1000GENOMES ss230731649 Jul 14, 2010 (132)
30 1000GENOMES ss238379598 Jul 15, 2010 (132)
31 ILLUMINA ss244313058 Jul 04, 2010 (132)
32 BL ss253508318 May 09, 2011 (134)
33 OMIM-CURATED-RECORDS ss256302319 Aug 26, 2010 (132)
34 GMI ss276050899 May 04, 2012 (137)
35 PJP ss290636907 May 09, 2011 (134)
36 NHLBI-ESP ss341996572 May 09, 2011 (134)
37 ILLUMINA ss410955100 Sep 17, 2011 (135)
38 ILLUMINA ss481798724 May 04, 2012 (137)
39 ILLUMINA ss481831163 May 04, 2012 (137)
40 ILLUMINA ss482792951 Sep 08, 2015 (146)
41 ILLUMINA ss485694013 May 04, 2012 (137)
42 1000GENOMES ss489766789 May 04, 2012 (137)
43 EXOME_CHIP ss491302298 May 04, 2012 (137)
44 CLINSEQ_SNP ss491605024 May 04, 2012 (137)
45 ILLUMINA ss537561371 Sep 08, 2015 (146)
46 TISHKOFF ss554693070 Apr 25, 2013 (138)
47 SSMP ss648413512 Apr 25, 2013 (138)
48 ILLUMINA ss778628223 Sep 08, 2015 (146)
49 ILLUMINA ss780693421 Sep 08, 2015 (146)
50 ILLUMINA ss783292587 Sep 08, 2015 (146)
51 ILLUMINA ss783367277 Sep 08, 2015 (146)
52 ILLUMINA ss784245144 Sep 08, 2015 (146)
53 ILLUMINA ss832553854 Sep 08, 2015 (146)
54 ILLUMINA ss834085795 Sep 08, 2015 (146)
55 JMKIDD_LAB ss974437339 Aug 21, 2014 (142)
56 EVA-GONL ss975681805 Aug 21, 2014 (142)
57 JMKIDD_LAB ss1067426454 Aug 21, 2014 (142)
58 JMKIDD_LAB ss1068269028 Aug 21, 2014 (142)
59 1000GENOMES ss1292922256 Aug 21, 2014 (142)
60 DDI ss1425978703 Apr 01, 2015 (144)
61 EVA_GENOME_DK ss1574391544 Apr 01, 2015 (144)
62 EVA_FINRISK ss1584011360 Apr 01, 2015 (144)
63 EVA_DECODE ss1585063118 Apr 01, 2015 (144)
64 EVA_UK10K_ALSPAC ss1601212214 Apr 01, 2015 (144)
65 EVA_UK10K_TWINSUK ss1644206247 Apr 01, 2015 (144)
66 EVA_MGP ss1710925391 Apr 01, 2015 (144)
67 EVA_SVP ss1712370858 Apr 01, 2015 (144)
68 ILLUMINA ss1751872139 Sep 08, 2015 (146)
69 ILLUMINA ss1751872140 Sep 08, 2015 (146)
70 ILLUMINA ss1917735313 Feb 12, 2016 (147)
71 WEILL_CORNELL_DGM ss1918915740 Feb 12, 2016 (147)
72 ILLUMINA ss1946009501 Feb 12, 2016 (147)
73 ILLUMINA ss1958317442 Feb 12, 2016 (147)
74 GENOMED ss1966867356 Jul 19, 2016 (147)
75 JJLAB ss2019973349 Sep 14, 2016 (149)
76 ILLUMINA ss2094784541 Dec 20, 2016 (150)
77 USC_VALOUEV ss2147997834 Dec 20, 2016 (150)
78 HUMAN_LONGEVITY ss2166534077 Dec 20, 2016 (150)
79 ILLUMINA ss2632575971 Nov 08, 2017 (151)
80 ILLUMINA ss2632575972 Nov 08, 2017 (151)
81 ILLUMINA ss2635003266 Nov 08, 2017 (151)
82 GRF ss2697970692 Nov 08, 2017 (151)
83 GNOMAD ss2746450286 Nov 08, 2017 (151)
84 GNOMAD ss2761306139 Nov 08, 2017 (151)
85 AFFY ss2984879258 Nov 08, 2017 (151)
86 AFFY ss2985525006 Nov 08, 2017 (151)
87 SWEGEN ss2987750815 Nov 08, 2017 (151)
88 ILLUMINA ss3021136143 Nov 08, 2017 (151)
89 EVA_SAMSUNG_MC ss3023057206 Nov 08, 2017 (151)
90 BIOINF_KMB_FNS_UNIBA ss3023743808 Nov 08, 2017 (151)
91 CSHL ss3343710175 Nov 08, 2017 (151)
92 ILLUMINA ss3626208197 Oct 11, 2018 (152)
93 ILLUMINA ss3626208198 Oct 11, 2018 (152)
94 ILLUMINA ss3630608869 Oct 11, 2018 (152)
95 ILLUMINA ss3632909935 Oct 11, 2018 (152)
96 ILLUMINA ss3633605257 Oct 11, 2018 (152)
97 ILLUMINA ss3634349817 Oct 11, 2018 (152)
98 ILLUMINA ss3634349818 Oct 11, 2018 (152)
99 ILLUMINA ss3635298709 Oct 11, 2018 (152)
100 ILLUMINA ss3636029293 Oct 11, 2018 (152)
101 ILLUMINA ss3637049197 Oct 11, 2018 (152)
102 ILLUMINA ss3637787243 Oct 11, 2018 (152)
103 ILLUMINA ss3640057174 Oct 11, 2018 (152)
104 ILLUMINA ss3640057175 Oct 11, 2018 (152)
105 ILLUMINA ss3640987238 Oct 11, 2018 (152)
106 ILLUMINA ss3641281274 Oct 11, 2018 (152)
107 ILLUMINA ss3642796529 Oct 11, 2018 (152)
108 ILLUMINA ss3644505459 Oct 11, 2018 (152)
109 OMUKHERJEE_ADBS ss3646246056 Oct 11, 2018 (152)
110 URBANLAB ss3646791117 Oct 11, 2018 (152)
111 ILLUMINA ss3651470365 Oct 11, 2018 (152)
112 ILLUMINA ss3653648455 Oct 11, 2018 (152)
113 EGCUT_WGS ss3655690805 Jul 12, 2019 (153)
114 EVA_DECODE ss3687780631 Jul 12, 2019 (153)
115 ILLUMINA ss3725065263 Jul 12, 2019 (153)
116 ACPOP ss3727485061 Jul 12, 2019 (153)
117 ILLUMINA ss3744352541 Jul 12, 2019 (153)
118 ILLUMINA ss3744650727 Jul 12, 2019 (153)
119 ILLUMINA ss3744650728 Jul 12, 2019 (153)
120 EVA ss3746807078 Jul 12, 2019 (153)
121 PAGE_CC ss3770840839 Jul 12, 2019 (153)
122 ILLUMINA ss3772151862 Jul 12, 2019 (153)
123 ILLUMINA ss3772151863 Jul 12, 2019 (153)
124 PACBIO ss3783566021 Jul 12, 2019 (153)
125 PACBIO ss3789197617 Jul 12, 2019 (153)
126 PACBIO ss3794069622 Jul 12, 2019 (153)
127 KHV_HUMAN_GENOMES ss3799808935 Jul 12, 2019 (153)
128 EVA ss3823662841 Apr 25, 2020 (154)
129 EVA ss3825518547 Apr 25, 2020 (154)
130 EVA ss3825535580 Apr 25, 2020 (154)
131 EVA ss3825575713 Apr 25, 2020 (154)
132 EVA ss3826423702 Apr 25, 2020 (154)
133 EVA ss3836606346 Apr 25, 2020 (154)
134 EVA ss3842015562 Apr 25, 2020 (154)
135 SGDP_PRJ ss3850005110 Apr 25, 2020 (154)
136 KRGDB ss3895210949 Apr 25, 2020 (154)
137 KOGIC ss3945649259 Apr 25, 2020 (154)
138 FSA-LAB ss3983947068 Apr 25, 2021 (155)
139 FSA-LAB ss3983947069 Apr 25, 2021 (155)
140 EVA ss3984464736 Apr 25, 2021 (155)
141 EVA ss3986013147 Apr 25, 2021 (155)
142 EVA ss3986138863 Apr 25, 2021 (155)
143 TOPMED ss4468271198 Apr 25, 2021 (155)
144 TOMMO_GENOMICS ss5146478991 Apr 25, 2021 (155)
145 EVA ss5236873658 Apr 25, 2021 (155)
146 EVA ss5237163938 Apr 25, 2021 (155)
147 EVA ss5237632913 Oct 17, 2022 (156)
148 1000G_HIGH_COVERAGE ss5244290156 Oct 17, 2022 (156)
149 TRAN_CS_UWATERLOO ss5314397425 Oct 17, 2022 (156)
150 EVA ss5314650917 Oct 17, 2022 (156)
151 EVA ss5322044608 Oct 17, 2022 (156)
152 HUGCELL_USP ss5444883911 Oct 17, 2022 (156)
153 1000G_HIGH_COVERAGE ss5517616823 Oct 17, 2022 (156)
154 EVA ss5623916515 Oct 17, 2022 (156)
155 EVA ss5623997781 Oct 17, 2022 (156)
156 SANFORD_IMAGENETICS ss5626589990 Oct 17, 2022 (156)
157 TOMMO_GENOMICS ss5673673426 Oct 17, 2022 (156)
158 EVA ss5799410256 Oct 17, 2022 (156)
159 EVA ss5799498770 Oct 17, 2022 (156)
160 EVA ss5800046879 Oct 17, 2022 (156)
161 EVA ss5800085727 Oct 17, 2022 (156)
162 YY_MCH ss5801259456 Oct 17, 2022 (156)
163 EVA ss5832664428 Oct 17, 2022 (156)
164 EVA ss5847556318 Oct 17, 2022 (156)
165 EVA ss5848272617 Oct 17, 2022 (156)
166 EVA ss5849108575 Oct 17, 2022 (156)
167 EVA ss5936512223 Oct 17, 2022 (156)
168 EVA ss5938383733 Oct 17, 2022 (156)
169 EVA ss5979989929 Oct 17, 2022 (156)
170 EVA ss5981197351 Oct 17, 2022 (156)
171 1000Genomes NC_000001.10 - 154426970 Oct 11, 2018 (152)
172 1000Genomes_30x NC_000001.11 - 154454494 Oct 17, 2022 (156)
173 The Avon Longitudinal Study of Parents and Children NC_000001.10 - 154426970 Oct 11, 2018 (152)
174 Genetic variation in the Estonian population NC_000001.10 - 154426970 Oct 11, 2018 (152)
175 ExAC NC_000001.10 - 154426970 Oct 11, 2018 (152)
176 FINRISK NC_000001.10 - 154426970 Apr 25, 2020 (154)
177 The Danish reference pan genome NC_000001.10 - 154426970 Apr 25, 2020 (154)
178 gnomAD - Genomes NC_000001.11 - 154454494 Apr 25, 2021 (155)
179 gnomAD - Exomes NC_000001.10 - 154426970 Jul 12, 2019 (153)
180 Genome of the Netherlands Release 5 NC_000001.10 - 154426970 Apr 25, 2020 (154)
181 HapMap NC_000001.11 - 154454494 Apr 25, 2020 (154)
182 KOREAN population from KRGDB NC_000001.10 - 154426970 Apr 25, 2020 (154)
183 Korean Genome Project NC_000001.11 - 154454494 Apr 25, 2020 (154)
184 Medical Genome Project healthy controls from Spanish population NC_000001.10 - 154426970 Apr 25, 2020 (154)
185 Northern Sweden NC_000001.10 - 154426970 Jul 12, 2019 (153)
186 The PAGE Study NC_000001.11 - 154454494 Jul 12, 2019 (153)
187 CNV burdens in cranial meningiomas NC_000001.10 - 154426970 Apr 25, 2021 (155)
188 Qatari NC_000001.10 - 154426970 Apr 25, 2020 (154)
189 SGDP_PRJ NC_000001.10 - 154426970 Apr 25, 2020 (154)
190 Siberian NC_000001.10 - 154426970 Apr 25, 2020 (154)
191 8.3KJPN NC_000001.10 - 154426970 Apr 25, 2021 (155)
192 14KJPN NC_000001.11 - 154454494 Oct 17, 2022 (156)
193 TopMed NC_000001.11 - 154454494 Apr 25, 2021 (155)
194 UK 10K study - Twins NC_000001.10 - 154426970 Oct 11, 2018 (152)
195 ALFA NC_000001.11 - 154454494 Apr 25, 2021 (155)
196 ClinVar RCV000015767.2 Oct 11, 2018 (152)
197 ClinVar RCV000029243.2 Oct 11, 2018 (152)
198 ClinVar RCV001514924.4 Oct 17, 2022 (156)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs8192284 May 24, 2008 (130)
rs52837205 Sep 21, 2007 (128)
rs58037860 May 24, 2008 (130)
rs117579727 Aug 16, 2010 (132)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss81092025 NC_000001.8:151240042:A:C NC_000001.11:154454493:A:C (self)
ss87824326, ss108598621, ss119031748, ss167132556, ss205146825, ss253508318, ss276050899, ss290636907, ss481798724, ss491605024, ss1585063118, ss1712370858, ss2635003266, ss3642796529 NC_000001.9:152693593:A:C NC_000001.11:154454493:A:C (self)
3714169, 2019210, 1429053, 5022844, 7821, 1708343, 913256, 877493, 2388343, 42143, 769926, 14050, 957670, 2022090, 514188, 4448298, 2019210, ss218650924, ss230731649, ss238379598, ss341996572, ss481831163, ss482792951, ss485694013, ss489766789, ss491302298, ss537561371, ss554693070, ss648413512, ss778628223, ss780693421, ss783292587, ss783367277, ss784245144, ss832553854, ss834085795, ss974437339, ss975681805, ss1067426454, ss1068269028, ss1292922256, ss1425978703, ss1574391544, ss1584011360, ss1601212214, ss1644206247, ss1710925391, ss1751872139, ss1751872140, ss1917735313, ss1918915740, ss1946009501, ss1958317442, ss1966867356, ss2019973349, ss2094784541, ss2147997834, ss2632575971, ss2632575972, ss2697970692, ss2746450286, ss2761306139, ss2984879258, ss2985525006, ss2987750815, ss3021136143, ss3023057206, ss3343710175, ss3626208197, ss3626208198, ss3630608869, ss3632909935, ss3633605257, ss3634349817, ss3634349818, ss3635298709, ss3636029293, ss3637049197, ss3637787243, ss3640057174, ss3640057175, ss3640987238, ss3641281274, ss3644505459, ss3646246056, ss3651470365, ss3653648455, ss3655690805, ss3727485061, ss3744352541, ss3744650727, ss3744650728, ss3746807078, ss3772151862, ss3772151863, ss3783566021, ss3789197617, ss3794069622, ss3823662841, ss3825518547, ss3825535580, ss3825575713, ss3826423702, ss3836606346, ss3850005110, ss3895210949, ss3983947068, ss3983947069, ss3984464736, ss3986013147, ss3986138863, ss5146478991, ss5314650917, ss5322044608, ss5623916515, ss5623997781, ss5626589990, ss5799410256, ss5799498770, ss5800046879, ss5800085727, ss5832664428, ss5847556318, ss5848272617, ss5936512223, ss5938383733, ss5979989929, ss5981197351 NC_000001.10:154426969:A:C NC_000001.11:154454493:A:C (self)
RCV000015767.2, RCV000029243.2, RCV001514924.4, 5142758, 27025870, 176326, 2027260, 62308, 7510530, 31877533, 746510828, ss169633700, ss256302319, ss2166534077, ss3023743808, ss3646791117, ss3687780631, ss3725065263, ss3770840839, ss3799808935, ss3842015562, ss3945649259, ss4468271198, ss5236873658, ss5237163938, ss5237632913, ss5244290156, ss5314397425, ss5444883911, ss5517616823, ss5673673426, ss5801259456, ss5849108575 NC_000001.11:154454493:A:C NC_000001.11:154454493:A:C (self)
ss12586468, ss16338697, ss44044481, ss48295187, ss48414048, ss65729818, ss68780517, ss74811108, ss74878395, ss99251101, ss102785579, ss119586912, ss159699006, ss160954756, ss161175954, ss174737355, ss181834220, ss181836017, ss244313058, ss410955100 NT_004487.19:5915611:A:C NC_000001.11:154454493:A:C (self)
ss16424581 NT_079484.1:876801:A:C NC_000001.11:154454493:A:C (self)
ss199085348 NC_000001.9:152693593:A:T NC_000001.11:154454493:A:T (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

137 citations for rs2228145
PMID Title Author Year Journal
15306846 Polymorphisms in the IL-6 receptor (IL-6R) gene: strong evidence that serum levels of soluble IL-6R are genetically influenced. Galicia JC et al. 2004 Genes and immunity
17357077 Admixture mapping of an allele affecting interleukin 6 soluble receptor and interleukin 6 levels. Reich D et al. 2007 American journal of human genetics
17671508 A common variant of the interleukin 6 receptor (IL-6r) gene increases IL-6r and IL-6 levels, without other inflammatory effects. Rafiq S et al. 2007 Genes and immunity
17898129 Interleukin-6 receptor gene variations, plasma interleukin-6 levels, and type 2 diabetes in U.S. Women. Qi L et al. 2007 Diabetes
17984249 Polymorphisms in the interleukin-6 receptor gene are associated with bone mineral density and body mass index in Spanish postmenopausal women. Bustamante M et al. 2007 European journal of endocrinology
18439548 Loci related to metabolic-syndrome pathways including LEPR,HNF1A, IL6R, and GCKR associate with plasma C-reactive protein: the Women's Genome Health Study. Ridker PM et al. 2008 American journal of human genetics
18781131 Interleukin and interleukin receptor gene polymorphisms and susceptibility to melanoma. Gu F et al. 2008 Melanoma research
18852197 Metabolic and cardiovascular traits: an abundance of recently identified common genetic variants. Mohlke KL et al. 2008 Human molecular genetics
18852330 Interleukin-6 receptor gene, plasma C-reactive protein, and diabetes risk in women. Qi L et al. 2009 Diabetes
18853133 Gene variants influencing measures of inflammation or predisposing to autoimmune and inflammatory diseases are not associated with the risk of type 2 diabetes. Rafiq S et al. 2008 Diabetologia
19124510 Insulin-like growth factor-1- and interleukin-6-related gene variation and risk of multiple myeloma. Birmann BM et al. 2009 Cancer epidemiology, biomarkers & prevention
19249341 Inflammation and stress-related candidate genes, plasma interleukin-6 levels, and longevity in older adults. Walston JD et al. 2009 Experimental gerontology
19280716 The IL6-174G/C polymorphism is associated with celiac disease susceptibility in girls. Dema B et al. 2009 Human immunology
19356949 Cytokine SNPs: Comparison of allele frequencies by race and implications for future studies. Van Dyke AL et al. 2009 Cytokine
19480857
19503017 Genetic ancestry modifies pharmacogenetic gene-gene interaction for asthma. Corvol H et al. 2009 Pharmacogenetics and genomics
19567438 Genetic Loci associated with C-reactive protein levels and risk of coronary heart disease. Elliott P et al. 2009 JAMA
19671870 Prognostic significance of interleukin-6 single nucleotide polymorphism genotypes in neuroblastoma: rs1800795 (promoter) and rs8192284 (receptor). Lagmay JP et al. 2009 Clinical cancer research
19713205 A gain of function polymorphism in the interleukin 6 receptor influences RA susceptibility. Marinou I et al. 2010 Annals of the rheumatic diseases
19773451 Role of inflammation gene polymorphisms on pain severity in lung cancer patients. Reyes-Gibby CC et al. 2009 Cancer epidemiology, biomarkers & prevention
19926672 Genotype at the sIL-6R A358C polymorphism does not influence response to anti-TNF therapy in patients with rheumatoid arthritis. Hassan B et al. 2010 Rheumatology (Oxford, England)
19967057 Association between Interleukin 31 Receptor A Gene Polymorphism and Schizophrenia in Korean Population. Ban JY et al. 2008 The Korean journal of physiology & pharmacology
20031577 Novel loci, including those related to Crohn disease, psoriasis, and inflammation, identified in a genome-wide association study of fibrinogen in 17 686 women: the Women's Genome Health Study. Danik JS et al. 2009 Circulation. Cardiovascular genetics
20031590 The relation of genetic and environmental factors to systemic inflammatory biomarker concentrations. Schnabel RB et al. 2009 Circulation. Cardiovascular genetics
20157327 A variant near the interleukin-6 gene is associated with fat mass in Caucasian men. Andersson N et al. 2010 International journal of obesity (2005)
20186139 Interleukin-6 receptor gene polymorphism modulates interleukin-6 levels and the metabolic syndrome: GBCS-CVD. Jiang CQ et al. 2010 Obesity (Silver Spring, Md.)
20197062 Interleukin-6 receptor gene polymorphisms were associated with sporadic Alzheimer's disease in Chinese Han. Wang M et al. 2010 Brain research
20357209 Molecular genetic studies of gene identification for osteoporosis: the 2009 update. Xu XH et al. 2010 Endocrine reviews
20551110 Influence of IL6R rs8192284 polymorphism status in disease activity in rheumatoid arthritis. Lamas JR et al. 2010 The Journal of rheumatology
20661738 Plasma soluble IL-6 receptor concentration in rheumatoid arthritis: associations with the rs8192284 IL6R polymorphism and with disease activity. Rodríguez-Rodríguez L et al. 2011 Rheumatology international
20811626 Genetic variants in inflammation-related genes are associated with radiation-induced toxicity following treatment for non-small cell lung cancer. Hildebrandt MA et al. 2010 PloS one
20978265 Association of genomic loci from a cardiovascular gene SNP array with fibrinogen levels in European Americans and African-Americans from six cohort studies: the Candidate Gene Association Resource (CARe). Wassel CL et al. 2011 Blood
21333900 The role of genetics in IBS. Saito YA et al. 2011 Gastroenterology clinics of North America
21496483 Fatigued breast cancer survivors and gene polymorphisms in the inflammatory pathway. Reinertsen KV et al. 2011 Brain, behavior, and immunity
21523452 Genetic variation in proinflammatory cytokines IL6, IL6R, TNF-region, and TNFRSF1A and risk of breast cancer. Madeleine MM et al. 2011 Breast cancer research and treatment
21835044 Association between interleukin-6 receptor gene variations and atherosclerotic lipid profiles among young adolescents in Taiwan. Chu NF et al. 2011 Lipids in health and disease
21846873 Large-scale candidate gene analysis in whites and African Americans identifies IL6R polymorphism in relation to atrial fibrillation: the National Heart, Lung, and Blood Institute's Candidate Gene Association Resource (CARe) project. Schnabel RB et al. 2011 Circulation. Cardiovascular genetics
21937998 Single-nucleotide polymorphisms at five loci are associated with C-reactive protein levels in a cohort of Filipino young adults. Curocichin G et al. 2011 Journal of human genetics
21981268 Lack of association of IL6R rs2228145 and IL6ST/gp130 rs2228044 gene polymorphisms with cardiovascular disease in patients with rheumatoid arthritis. López-Mejías R et al. 2011 Tissue antigens
22128229 Proinflammatory gene polymorphisms are potentially associated with Korean non-Sjogren dry eye patients. Na KS et al. 2011 Molecular vision
22265947 Multigenic control of measles vaccine immunity mediated by polymorphisms in measles receptor, innate pathway, and cytokine genes. Kennedy RB et al. 2012 Vaccine
22291609 A genome-wide association scan on the levels of markers of inflammation in Sardinians reveals associations that underpin its complex regulation. Naitza S et al. 2012 PLoS genetics
22359581 Th17-related genes and celiac disease susceptibility. Medrano LM et al. 2012 PloS one
22421339 Interleukin-6 receptor pathways in coronary heart disease: a collaborative meta-analysis of 82 studies. Sarwar N et al. 2012 Lancet (London, England)
22421340 The interleukin-6 receptor as a target for prevention of coronary heart disease: a mendelian randomisation analysis. Swerdlow DI et al. 2012 Lancet (London, England)
22492993 C-reactive protein (CRP) promoter polymorphisms influence circulating CRP levels in a genome-wide association study of African Americans. Doumatey AP et al. 2012 Human molecular genetics
22553514 Single nucleotide polymorphisms of metabolic syndrome-related genes in primary open angle glaucoma. Zhou G et al. 2010 International journal of ophthalmology
22554704 The IL6R variation Asp(358)Ala is a potential modifier of lung function in subjects with asthma. Hawkins GA et al. 2012 The Journal of allergy and clinical immunology
22595970 Identification of cis-regulatory variation influencing protein abundance levels in human plasma. Lourdusamy A et al. 2012 Human molecular genetics
22674296 Interleukin genes and associations with colon and rectal cancer risk and overall survival. Bondurant KL et al. 2013 International journal of cancer
22742541 No evidence of association between functional polymorphisms located within IL6R and IL6ST genes and systemic sclerosis. Cénit MC et al. 2012 Tissue antigens
22927710 Genetic markers of cardiovascular disease in rheumatoid arthritis. Rodríguez-Rodríguez L et al. 2012 Mediators of inflammation
23024462 Atherosclerosis and rheumatoid arthritis: more than a simple association. Cavagna L et al. 2012 Mediators of inflammation
23073775 Association of two variants in the interleukin-6 receptor gene and premature coronary heart disease in a Chinese Han population. Chen Z et al. 2013 Molecular biology reports
23094986 Interleukin-6 receptor gene 48892 A/C polymorphism is associated with metabolic syndrome in female Taiwanese adolescents. Hsieh CH et al. 2012 Genetic testing and molecular biomarkers
23111417 Interleukin-6 receptor pathways in abdominal aortic aneurysm. Harrison SC et al. 2013 European heart journal
23505291 Gene-centric analysis identifies variants associated with interleukin-6 levels and shared pathways with other inflammation markers. Shah T et al. 2013 Circulation. Cardiovascular genetics
23533647 Polymorphisms in the calcium-sensing receptor gene are associated with clinical outcome of neuroblastoma. Masvidal L et al. 2013 PloS one
23594084 The interleukin 6 receptor alpha gene polymorphisms are associated with clinical manifestations of systemic lupus erythematosus in Koreans. Jeon JY et al. 2013 International journal of immunogenetics
23696881 Imputation of variants from the 1000 Genomes Project modestly improves known associations and can identify low-frequency variant-phenotype associations undetected by HapMap based imputation. Wood AR et al. 2013 PloS one
23891823 Impact of genetic variants of IL-6, IL6R, LRP5, ESR1 and SP7 genes on bone mineral density in postmenopausal Mexican-Mestizo women with obesity. Méndez JP et al. 2013 Gene
24059848 Interleukin-6 polymorphisms and hematologic malignancy: a re-appraisal of evidence from genetic association studies. Ziakas PD et al. 2013 Biomarkers
24285489 Investigation of an interleukin-6 receptor gene polymorphism (rs2228145) as a predictor of cardiovascular mortality in inflammatory polyarthritis: results from the Norfolk Arthritis Register. Ibrahim I et al. 2014 Annals of the rheumatic diseases
24763700 New variants including ARG1 polymorphisms associated with C-reactive protein levels identified by genome-wide association and pathway analysis. Vinayagamoorthy N et al. 2014 PloS one
24791950 The contribution of the functional IL6R polymorphism rs2228145, eQTLs and other genome-wide SNPs to the heritability of plasma sIL-6R levels. van Dongen J et al. 2014 Behavior genetics
24878322 The interleukin-6 receptor Asp358Ala single nucleotide polymorphism rs2228145 confers increased proteolytic conversion rates by ADAM proteases. Garbers C et al. 2014 Biochimica et biophysica acta
24886605 Genetic modulation of the interleukin 6 (IL-6) system in patients with advanced gastric cancer: a background for an alternative target therapy. Ruzzo A et al. 2014 BMC cancer
24978393 Interleukin-6-receptor polymorphisms rs12083537, rs2228145, and rs4329505 as predictors of response to tocilizumab in rheumatoid arthritis. Enevold C et al. 2014 Pharmacogenetics and genomics
25098560 Genetic polymorphisms associated with rubella virus-specific cellular immunity following MMR vaccination. Kennedy RB et al. 2014 Human genetics
25781951 Analysis of the role of interleukin 6 receptor haplotypes in the regulation of circulating levels of inflammatory biomarkers and risk of coronary heart disease. Gigante B et al. 2015 PloS one
25813875 Interleukin and growth factor gene variants and risk of carpal tunnel syndrome. Burger MC et al. 2015 Gene
26198920 Family-based association study of interleukin 6 (IL6) and its receptor (IL6R) functional polymorphisms in schizophrenia in the Polish population. Kapelski P et al. 2015 Journal of neuroimmunology
26336855 Variation at interleukin-6 receptor gene is associated to joint damage in rheumatoid arthritis. Lopez-Lasanta M et al. 2015 Arthritis research & therapy
26582562 Signatures of Evolutionary Adaptation in Quantitative Trait Loci Influencing Trace Element Homeostasis in Liver. Engelken J et al. 2016 Molecular biology and evolution
26725994 Interleukin-6, interleukin-6 receptor gene variant, small-vessel disease and incident dementia. Miwa K et al. 2016 European journal of neurology
26843965 Identification of rheumatoid arthritis biomarkers based on single nucleotide polymorphisms and haplotype blocks: A systematic review and meta-analysis. Saad MN et al. 2016 Journal of advanced research
26846412 Ancestry informative markers and selected single nucleotide polymorphisms in immunoregulatory genes on preterm labor and preterm premature rupture of membranes: a case control study. Ramos BR et al. 2016 BMC pregnancy and childbirth
26955245 Interleukin-6 Receptor Polymorphisms Contribute to the Neurological Status of Korean Patients with Ischemic Stroke. Kim DH et al. 2016 Journal of Korean medical science
26997259 The IL6R gene polymorphisms are associated with sIL-6R, IgE and lung function in Chinese patients with asthma. Wang Y et al. 2016 Gene
27177774 Interactive effects of C-reactive protein levels on the association between APOE variants and triglyceride levels in a Taiwanese population. Wu S et al. 2016 Lipids in health and disease
27327646 Investigating the Causal Relationship of C-Reactive Protein with 32 Complex Somatic and Psychiatric Outcomes: A Large-Scale Cross-Consortium Mendelian Randomization Study. Prins BP et al. 2016 PLoS medicine
27338350 Rheumatoid Arthritis: The Stride from Research to Clinical Practice. Chung IM et al. 2016 International journal of molecular sciences
27454212 Meta-Analysis of Cytokine and Chemokine Genes in Schizophrenia. Hudson ZD et al. 2018 Clinical schizophrenia & related psychoses
27525545 Association of IL-6 Promoter and Receptor Polymorphisms with Multiple Myeloma Risk: A Systematic Review and Meta-Analysis. Li Y et al. 2016 Genetic testing and molecular biomarkers
27532455 Common Genetic Polymorphisms Influence Blood Biomarker Measurements in COPD. Sun W et al. 2016 PLoS genetics
27589735 A Genomics-Based Model for Prediction of Severe Bioprosthetic Mitral Valve Calcification. Ponasenko AV et al. 2016 International journal of molecular sciences
27777593 Genetic and epigenetic studies of atopic dermatitis. Bin L et al. 2016 Allergy, asthma, and clinical immunology
27958380 Influence of IL6R gene polymorphisms in the effectiveness to treatment with tocilizumab in rheumatoid arthritis. Maldonado-Montoro M et al. 2018 The pharmacogenomics journal
28106546 A Common Variant of IL-6R is Associated with Elevated IL-6 Pathway Activity in Alzheimer's Disease Brains. Haddick PC et al. 2017 Journal of Alzheimer's disease
28107422 Comparison of HapMap and 1000 Genomes Reference Panels in a Large-Scale Genome-Wide Association Study. de Vries PS et al. 2017 PloS one
28144260 The rs2228145 polymorphism in the interleukin-6 receptor and its association with long-term prognosis after myocardial infarction in a pilot study. Szpakowicz A et al. 2017 Archives of medical science
28442395 Association of genetic variations in IL-6/IL-6R pathway genes with gastric cancer risk in a Chinese population. Zhang JZ et al. 2017 Gene
28593468 Association of the IL6 rs1800796, but not of the IL6 rs1800795, IL6R rs4845617 and rs2228145 polymorphisms with hip fracture in elderly Mexican women. Ponce de León-Suárez V et al. 2018 Aging clinical and experimental research
28650998 Functional annotation of Alzheimer's disease associated loci revealed by GWASs. Han Z et al. 2017 PloS one
29197507 Association between a functional interleukin 6 receptor genetic variant and risk of depression and psychosis in a population-based birth cohort. Khandaker GM et al. 2018 Brain, behavior, and immunity
29513361 A pilot study of single nucleotide polymorphisms in the interleukin-6 receptor and their effects on pre- and post-transplant serum mediator level and outcome after allogeneic stem cell transplantation. Tvedt THA et al. 2018 Clinical and experimental immunology
29688528 Smoking, Systemic Inflammation, and Airflow Limitation: A Mendelian Randomization Analysis of 98 085 Individuals From the General Population. Çolak Y et al. 2019 Nicotine & tobacco research
29775600 Variation in Interleukin 6 Receptor Gene Associates With Risk of Crohn's Disease and Ulcerative Colitis. Parisinos CA et al. 2018 Gastroenterology
29797122 IL6R Gene Polymorphic Variant rs2228145(C >A) as a Marker of Genetic Liability to Nonalcoholic Steatohepatitis in the Russian Population of Karelia. Topchieva LV et al. 2018 Bulletin of experimental biology and medicine
30090940 Association of Interleukin 6 Receptor Variant With Cardiovascular Disease Effects of Interleukin 6 Receptor Blocking Therapy: A Phenome-Wide Association Study. Cai T et al. 2018 JAMA cardiology
30228077 Association of IL4R-rs1805016 and IL6R-rs8192284 polymorphisms with clinical dengue in children from Colombian populations. Useche YM et al. 2019 Journal of infection and public health
30651573 Prognostic role of genetic polymorphisms of the interleukin-6 signaling pathway in patients with severe heart failure. Hansen PR et al. 2019 The pharmacogenomics journal
30657332 Interleukin-6 Receptor Signaling and Abdominal Aortic Aneurysm Growth Rates. Paige E et al. 2019 Circulation. Genomic and precision medicine
30662970 IL6/IL6R genetic diversity and plasma IL6 levels in bipolar disorder: An Indo-French study. Sundaresh A et al. 2019 Heliyon
30787661 Are IL1B, IL6 and IL6R Gene Variants Associated with Anterior Cruciate Ligament Rupture Susceptibility? Lulińska-Kuklik E et al. 2019 Journal of sports science & medicine
31021550 Evaluation of variants in IL6R, TLR3, and DC-SIGN genes associated with dengue in sampled Colombian population. Avendaño-Tamayo E et al. 2019 Biomedica
31237452 The IL-6-neutralizing sIL-6R-sgp130 buffer system is disturbed in patients with type 2 diabetes. Aparicio-Siegmund S et al. 2019 American journal of physiology. Endocrinology and metabolism
31341681 Lack of Association between the IL6R Gene Asp358Ala Variant (rs2228145), IL-6 Plasma Levels, and Treatment Resistance in Chilean Schizophrenic Patients Treated with Clozapine. Cavieres A et al. 2019 Schizophrenia research and treatment
31395468 Functional polymorphisms within the inflammatory pathway regulate expression of extracellular matrix components in a genetic risk dependent model for anterior cruciate ligament injuries. Suijkerbuijk MAM et al. 2019 Journal of science and medicine in sport
31468132 Association of Variants in IL6-Related Genes with Lung Cancer Risk in Moroccan Population. Kaanane H et al. 2019 Lung
31611269 IL6 receptor(358)Ala variant and trans-signaling are disease modifiers in amyotrophic lateral sclerosis. Wosiski-Kuhn M et al. 2019 Neurology(R) neuroimmunology & neuroinflammation
31744360 Influence of single nucleotide polymorphisms (SNPs) in immunoregulatory genes in the morbidity of preterm newborns. Ribeiro de Andrade Ramos B et al. 2021 The journal of maternal-fetal & neonatal medicine
31836512 Polymorphism of IL6 receptor gene is associated with ischaemic stroke in patients with metabolic syndrome. Huang X et al. 2020 Brain research
31900081 Inflammatory biomarkers and risk of ischemic stroke and subtypes: A 2-sample Mendelian randomization study. Lin J et al. 2020 Neurological research
31929778 Association between Hepatitis C Virus Viremia and the rs12979860, rs2228145 and rs1800795 SNP (CT/AC/GG) Genotype in Saudi Kidney Transplant Recipients. Alkharsah KR et al. 2020 Saudi journal of medicine & medical sciences
32064097 Association between interleukin gene polymorphisms and multiple myeloma susceptibility. Shahzad MN et al. 2020 Molecular and clinical oncology
32292581 Methylation Pattern of the SOCS3 and IL6R Promoters in Rheumatoid Arthritis. Cieśla M et al. 2020 International journal of inflammation
32328834 Mendelian randomization study to evaluate the effects of interleukin-6 signaling on four neurodegenerative diseases. Zhang H et al. 2020 Neurological sciences
32535289 Polymorphisms in genes involved in inflammation, the NF-kB pathway and the renin-angiotensin-aldosterone system are associated with the risk of osteoporotic fracture. The Hortega Follow-up Study. Usategui-Martín R et al. 2020 Bone
32831971 Investigating the GWAS-Implicated Loci for Rheumatoid Arthritis in the Pakistani Population. Aslam MM et al. 2020 Disease markers
32936528 Important Pharmacogenetic Information for Drugs Prescribed During the SARS-CoV-2 Infection (COVID-19). Zubiaur P et al. 2020 Clinical and translational science
33339153 Investigation of Genetic Variations of IL6 and IL6R as Potential Prognostic and Pharmacogenetics Biomarkers: Implications for COVID-19 and Neuroinflammatory Disorders. Strafella C et al. 2020 Life (Basel, Switzerland)
33522443 Risk modelling further implicates the angiogenesis pathway in anterior cruciate ligament ruptures. Rahim M et al. 2022 European journal of sport science
33815092 Genetic Variability in Molecular Pathways Implicated in Alzheimer's Disease: A Comprehensive Review. Vogrinc D et al. 2021 Frontiers in aging neuroscience
33835216 Soluble IL-6R-mediated IL-6 trans-signaling activation contributes to the pathological development of psoriasis. Xu H et al. 2021 Journal of molecular medicine (Berlin, Germany)
34353696 Assessing the potential correlation of polymorphisms in the IL6R with relative IL6 elevation in severely ill COVID-19 patients'. Smieszek SP et al. 2021 Cytokine
34389747 Donor genetic variants in interleukin-6 and interleukin-6 receptor associate with biopsy-proven rejection following kidney transplantation. Poppelaars F et al. 2021 Scientific reports
34484216 Alternative Splicing: A New Cause and Potential Therapeutic Target in Autoimmune Disease. Ren P et al. 2021 Frontiers in immunology
34827409 Associations of Immune Genetic Variability with Gulf War Illness in 1990-1991 Gulf War Veterans from the Gulf War Illness Consortium (GWIC) Multisite Case-Control Study. Coller JK et al. 2021 Brain sciences
34834553 Innate-Immunity Genes in Obesity. Mikhailova SV et al. 2021 Journal of personalized medicine
35088123 Genetics of rheumatoid arthritis. Padyukov L et al. 2022 Seminars in immunopathology
35338260 Association of the IL-6R gene polymorphic variant rs2228145(C>A) with IL-6 gene polymorphisms in a healthy cohort of Turkish population. Karcıoğlu Batur L et al. 2022 Genes and immunity
35493452 Cumulative Evidence for Associations Between Genetic Variants in Interleukin 6 Receptor Gene and Human Diseases and Phenotypes. Zhang M et al. 2022 Frontiers in immunology
35521908 Single nucleotide polymorphisms located in TNFA, IL1RN, IL6R, and IL6 genes are associated with COVID-19 risk and severity in an Iranian population. Rokni M et al. 2022 Cell biology international
35747747 Interleukin-6 Receptor Blockade can Increase the Risk of Nonalcoholic Fatty Liver Disease: Indications From Mendelian Randomization. Li S et al. 2022 Frontiers in pharmacology
35886067 Genetic Biomarkers as Predictors of Response to Tocilizumab in Rheumatoid Arthritis: A Systematic Review and Meta-Analysis. Janahiraman S et al. 2022 Genes
35911690 IL-6-Driven pSTAT1 Response Is Linked to T Cell Features Implicated in Early Immune Dysregulation. Lambert K et al. 2022 Frontiers in immunology
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

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Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post820+afb47a3d