NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss253508318           
Submitter
HandleBL
Submitter SNP IDSNP141865_1_152693594
RefSNP(rs#)rs2228145
Submitted Batch IDIrish1_chr1
Submitted DateAug 18, 2010
Publication CitedN.D.
First entry to dbSNPAug 18 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodIRISH_GENOME_SEQUENCING
Ascertainment Samplesize2
PopulationIrish
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginA:Germline C:Germline
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss253508318|allelePos=251|len=501|taxid=9606|alleles='A/C'|mol=Genomic
 TGGAATCCTG GAATCTAGAG TGGGCTTTGT TAAGAAACAA ACAAACAAAC AAACAAAAAA
 CAGTTAAGCT TGTCAAATGG CCTGTTGGTT GGCAGAGCTG TTTCATTTTC TGGGAGGGGG
 GTTGGAGGGG AAGGTTCCTT TGAGGCTTTT GACAGCACCA GCTAAGTGGT TTTCTTCTCC
 TCCTATTCCT TTTTCTCCAT ATTCTCCTCT TCCTCCTCTA TCTTCAATTT TTTTTTTAAC
 CTAGTGCAAG
 M
 TTCTTCTTCA GTACCACTGC CCACATTCCT GGTTGCTGGA GGGAGCCTGG CCTTCGGAAC
 GCTCCTCTGC ATTGCCATTG TTCTGAGGTG AGATGGGTCC CAGGGGATGG CCCTGTGGTG
 TTCTCATATT TCTTATCTAG CTTTCCTTTG CCCATTCTGA AATTTATGGT GCATTTATTC
 ATTCATTTAT CCATTCATCA AATGAATGCA CACACCACAA CACACACAAC ACCTACTATT
 ATGCCAAGCC

  Submitted Frequency for ss253508318 back to top
There is no frequency submission for ss253508318.


  dbSNP summary of Genotypes for ss253508318 back to top
No sufficient data to compute Hardy-weinberg probability for ss253508318.


  Submitted individual genotype for ss253508318 back to top
There is no individual genotype data for ss253508318.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement