NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss119031748           
Submitter
HandleILLUMINA-UK
Submitter SNP IDNA18507_000147108_NCBI36.1_chr1_152693594
RefSNP(rs#)rs2228145
Submitted Batch IDILLUMINA_WTSI:NA18507_c1
Submitted DateJan 21, 2009
Publication Cited18987734
First entry to dbSNPJan 21 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodILLUMINA SEQUENCING
Ascertainment Samplesize2
PopulationYRI
Allele
Observed AlleleC/A
Ancestral AlleleN.D.
Allele OriginA:Germline C:Germline
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss119031748|allelePos=251|len=501|taxid=9606|alleles='C/A'|mol=Genomic
 TGGAATCCTG GAATCTAGAG TGGGCTTTGT TAAGAAACAA ACAAACAAAC AAACAAAAAA
 CAGTTAAGCT TGTCAAATGG CCTGTTGGTT GGCAGAGCTG TTTCATTTTC TGGGAGGGGG
 GTTGGAGGGG AAGGTTCCTT TGAGGCTTTT GACAGCACCA GCTAAGTGGT TTTCTTCTCC
 TCCTATTCCT TTTTCTCCAT ATTCTCCTCT TCCTCCTCTA TCTTCAATTT TTTTTTTAAC
 CTAGTGCAAG
 M
 TTCTTCTTCA GTACCACTGC CCACATTCCT GGTTGCTGGA GGGAGCCTGG CCTTCGGAAC
 GCTCCTCTGC ATTGCCATTG TTCTGAGGTG AGATGGGTCC CAGGGGATGG CCCTGTGGTG
 TTCTCATATT TCTTATCTAG CTTTCCTTTG CCCATTCTGA AATTTATGGT GCATTTATTC
 ATTCATTTAT CCATTCATCA AATGAATGCA CACACCACAA CACACACAAC ACCTACTATT
 ATGCCAAGCC

  Submitted Frequency for ss119031748 back to top
There is no frequency submission for ss119031748.


  dbSNP summary of Genotypes for ss119031748 back to top
No sufficient data to compute Hardy-weinberg probability for ss119031748.


  Submitted individual genotype for ss119031748 back to top
There is no individual genotype data for ss119031748.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement