NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss1966867356           
Submitter
HandleGENOMED
Submitter SNP IDrs2228145
RefSNP(rs#)rs2228145
Submitted Batch IDCLG_Seq18
Submitted DateFeb 16, 2016
Publication Cited[1] Whole-genome sequencing reveals large diversity in the Amerindian components of modern Chileans - ChileGenomico Project
First entry to dbSNPFeb 16 2016 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodSOLID_WHOLE_GENOME
Ascertainment Samplesize36
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginA:Germline C:Germline
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1966867356|allelePos=26|len=51|taxid=9606|alleles='A/C'|mol=Genomic
 AATTTTTTTT TTAACCTAGT GCAAG
 M
 TTCTTCTTCA GTACCACTGC CCACA

  Submitted Frequency for ss1966867356 back to top
There is no frequency submission for ss1966867356.


  dbSNP summary of Genotypes for ss1966867356 back to top
No sufficient data to compute Hardy-weinberg probability for ss1966867356.


  Submitted individual genotype for ss1966867356 back to top
There is no individual genotype data for ss1966867356.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement