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Series GSE4532 Query DataSets for GSE4532
Status Public on Sep 08, 2006
Title Cross-hybridization comparison between cRNA target and cDNA target
Organism Homo sapiens
Experiment type Expression profiling by array
Summary We used two RNA samples that differed only by a set of three hemoglobin transcripts to compare microarray cross-hybridization between two target preparation protocols. We found widespread cross-hybridization using standard cRNA target but substantially less cross-hybridization using cDNA target.
Keywords: protocol comparison
Overall design 2 protocols x 2 RNA samples x 3 replicates = 12 arrays.
Contributor(s) Eklund AC, Turner LR, Chen P, Jensen RV, deFeo G, Kopf-Sill AR, Szallasi Z
Citation(s) 16964210
Submission date Mar 24, 2006
Last update date Dec 06, 2018
Contact name Aron C Eklund
Organization name Technical University of Denmark
Department Center for Biological Sequence Analysis
Street address Kemitorvet, Building 208
City Lyngby
ZIP/Postal code 2800
Country Denmark
Platforms (1)
GPL571 [HG-U133A_2] Affymetrix Human Genome U133A 2.0 Array
Samples (12)
GSM101569 Jurkat, cRNA target, replicate 1
GSM101570 Jurkat, cRNA target, replicate 2
GSM101571 Jurkat, cRNA target, replicate 3
BioProject PRJNA94457

Download family Format
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Supplementary file Size Download File type/resource
GSE4532_RAW.tar 38.9 Mb (http)(custom) TAR (of CEL, EXP)

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