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ATXN2 ataxin 2 [ Canis lupus familiaris (dog) ]

Gene ID: 486270, updated on 17-Aug-2024

Summary

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Official Symbol
ATXN2provided by VGNC
Official Full Name
ataxin 2provided by VGNC
Primary source
VGNC:VGNC:38301
See related
Ensembl:ENSCAFG00845029435
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See ATXN2 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
27
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 26 NC_051830.1 (9333114..9448244, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 26 NC_006608.4 (9236242..9351196, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 26 NC_049247.1 (9304823..9419816, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 26 NC_049286.1 (9289083..9404017, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 26 NC_049767.1 (9351063..9466629, complement)

Chromosome 26 - NC_051830.1Genomic Context describing neighboring genes Neighboring gene cut like homeobox 2 Neighboring gene PH domain containing endocytic trafficking adaptor 1 Neighboring gene SH2B adaptor protein 3 Neighboring gene BRCA1 associated protein Neighboring gene acyl-CoA dehydrogenase family member 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in stress granule assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic stress granule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ataxin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051830.1 Reference ROS_Cfam_1.0

    Range
    9333114..9448244 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038436691.1 → XP_038292619.1  ataxin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0P7D3, A0A8C0THS8, A0A8I3Q8E2
    Conserved Domains (5) summary
    PHA03247
    Location:664 → 1008
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  2. XM_038436685.1 → XP_038292613.1  ataxin-2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KWZ6, A0A8C0THS8, A0A8I3Q8E2, A0A8P0STY8
    Related
    ENSCAFP00845041753.1, ENSCAFT00845053181.1
    Conserved Domains (5) summary
    PHA03247
    Location:664 → 1006
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  3. XM_038436684.1 → XP_038292612.1  ataxin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0P7D3, A0A8C0THS8, A0A8I3Q8E2
    Conserved Domains (5) summary
    PHA03247
    Location:664 → 1008
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  4. XM_038436690.1 → XP_038292618.1  ataxin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0P7D3, A0A8C0THS8, A0A8I3Q8E2
    Conserved Domains (5) summary
    PHA03247
    Location:664 → 1008
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  5. XM_038436688.1 → XP_038292616.1  ataxin-2 isoform X5

    UniProtKB/TrEMBL
    A0A8C0THS8, A0A8I3Q8E2
    Conserved Domains (5) summary
    PHA03247
    Location:664 → 982
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  6. XM_038436689.1 → XP_038292617.1  ataxin-2 isoform X6

    UniProtKB/TrEMBL
    A0A8I3QWW9
    Related
    ENSCAFP00845041818.1, ENSCAFT00845053253.1
    Conserved Domains (5) summary
    PHA03247
    Location:594 → 938
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:576 → 590
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  7. XM_038436687.1 → XP_038292615.1  ataxin-2 isoform X4

    UniProtKB/TrEMBL
    A0A8C0THS8, A0A8I3Q8E2
    Related
    ENSCAFP00845041833.1, ENSCAFT00845053269.1
    Conserved Domains (5) summary
    PHA03247
    Location:665 → 1007
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  8. XM_038436686.1 → XP_038292614.1  ataxin-2 isoform X3

    UniProtKB/TrEMBL
    A0A8C0THS8, A0A8I3Q8E2
    Conserved Domains (5) summary
    PHA03247
    Location:664 → 990
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049286.1 Alternate UMICH_Zoey_3.1

    Range
    9289083..9404017 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038511608.1 → XP_038367536.1  ataxin-2 isoform X1

    Conserved Domains (5) summary
    PHA03247
    Location:664 → 1008
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  2. XM_038511602.1 → XP_038367530.1  ataxin-2 isoform X2

    Conserved Domains (5) summary
    PHA03247
    Location:664 → 1006
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  3. XM_038511601.1 → XP_038367529.1  ataxin-2 isoform X1

    Conserved Domains (5) summary
    PHA03247
    Location:664 → 1008
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  4. XM_038511607.1 → XP_038367535.1  ataxin-2 isoform X1

    Conserved Domains (5) summary
    PHA03247
    Location:664 → 1008
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  5. XM_038511605.1 → XP_038367533.1  ataxin-2 isoform X5

    Conserved Domains (5) summary
    PHA03247
    Location:664 → 982
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  6. XM_038511606.1 → XP_038367534.1  ataxin-2 isoform X6

    Conserved Domains (5) summary
    PHA03247
    Location:594 → 938
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:576 → 590
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  7. XM_038511604.1 → XP_038367532.1  ataxin-2 isoform X4

    Conserved Domains (5) summary
    PHA03247
    Location:665 → 1007
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  8. XM_038511603.1 → XP_038367531.1  ataxin-2 isoform X3

    Conserved Domains (5) summary
    PHA03247
    Location:664 → 990
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049767.1 Alternate UNSW_CanFamBas_1.0

    Range
    9351063..9466629 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038639287.1 → XP_038495215.1  ataxin-2 isoform X1

    Conserved Domains (5) summary
    PHA03247
    Location:664 → 1008
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  2. XM_038639281.1 → XP_038495209.1  ataxin-2 isoform X2

    Conserved Domains (5) summary
    PHA03247
    Location:664 → 1006
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  3. XM_038639280.1 → XP_038495208.1  ataxin-2 isoform X1

    Conserved Domains (5) summary
    PHA03247
    Location:664 → 1008
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  4. XM_038639286.1 → XP_038495214.1  ataxin-2 isoform X1

    Conserved Domains (5) summary
    PHA03247
    Location:664 → 1008
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  5. XM_038639284.1 → XP_038495212.1  ataxin-2 isoform X5

    Conserved Domains (5) summary
    PHA03247
    Location:664 → 982
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  6. XM_038639285.1 → XP_038495213.1  ataxin-2 isoform X6

    Conserved Domains (5) summary
    PHA03247
    Location:594 → 938
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:576 → 590
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  7. XM_038639283.1 → XP_038495211.1  ataxin-2 isoform X4

    Conserved Domains (5) summary
    PHA03247
    Location:665 → 1007
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  8. XM_038639282.1 → XP_038495210.1  ataxin-2 isoform X3

    Conserved Domains (5) summary
    PHA03247
    Location:664 → 990
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049247.1 Alternate UU_Cfam_GSD_1.0

    Range
    9304823..9419816 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038575099.1 → XP_038431027.1  ataxin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0P7D3, A0A8C0THS8, A0A8I3Q8E2
    Conserved Domains (5) summary
    PHA03247
    Location:664 → 1008
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  2. XM_038575093.1 → XP_038431021.1  ataxin-2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KWZ6, A0A8C0THS8, A0A8I3Q8E2, A0A8P0STY8
    Conserved Domains (5) summary
    PHA03247
    Location:664 → 1006
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  3. XM_038575092.1 → XP_038431020.1  ataxin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0P7D3, A0A8C0THS8, A0A8I3Q8E2
    Conserved Domains (5) summary
    PHA03247
    Location:664 → 1008
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  4. XM_038575098.1 → XP_038431026.1  ataxin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0P7D3, A0A8C0THS8, A0A8I3Q8E2
    Conserved Domains (5) summary
    PHA03247
    Location:664 → 1008
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  5. XM_038575096.1 → XP_038431024.1  ataxin-2 isoform X5

    UniProtKB/TrEMBL
    A0A8C0THS8, A0A8I3Q8E2
    Conserved Domains (5) summary
    PHA03247
    Location:664 → 982
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  6. XM_038575097.1 → XP_038431025.1  ataxin-2 isoform X6

    UniProtKB/TrEMBL
    A0A8I3QWW9
    Conserved Domains (5) summary
    PHA03247
    Location:594 → 938
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:576 → 590
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  7. XM_038575095.1 → XP_038431023.1  ataxin-2 isoform X4

    UniProtKB/TrEMBL
    A0A8C0THS8, A0A8I3Q8E2
    Conserved Domains (5) summary
    PHA03247
    Location:665 → 1007
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  8. XM_038575094.1 → XP_038431022.1  ataxin-2 isoform X3

    UniProtKB/TrEMBL
    A0A8C0THS8, A0A8I3Q8E2
    Conserved Domains (5) summary
    PHA03247
    Location:664 → 990
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006608.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    9236242..9351196 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038459145.1 → XP_038315073.1  ataxin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0P7D3, A0A8C0THS8, A0A8I3Q8E2
    Conserved Domains (5) summary
    PHA03247
    Location:664 → 1008
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  2. XM_038459139.1 → XP_038315067.1  ataxin-2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KWZ6, A0A8C0THS8, A0A8I3Q8E2, A0A8P0STY8
    Conserved Domains (5) summary
    PHA03247
    Location:664 → 1006
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  3. XM_038459138.1 → XP_038315066.1  ataxin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0P7D3, A0A8C0THS8, A0A8I3Q8E2
    Conserved Domains (5) summary
    PHA03247
    Location:664 → 1008
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  4. XM_038459144.1 → XP_038315072.1  ataxin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0P7D3, A0A8C0THS8, A0A8I3Q8E2
    Conserved Domains (5) summary
    PHA03247
    Location:664 → 1008
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  5. XM_038459142.1 → XP_038315070.1  ataxin-2 isoform X5

    UniProtKB/TrEMBL
    A0A8C0THS8, A0A8I3Q8E2
    Conserved Domains (5) summary
    PHA03247
    Location:664 → 982
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  6. XM_038459143.1 → XP_038315071.1  ataxin-2 isoform X6

    UniProtKB/TrEMBL
    A0A8I3QWW9
    Conserved Domains (5) summary
    PHA03247
    Location:594 → 938
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:576 → 590
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  7. XM_038459141.1 → XP_038315069.1  ataxin-2 isoform X4

    UniProtKB/TrEMBL
    A0A8C0THS8, A0A8I3Q8E2
    Conserved Domains (5) summary
    PHA03247
    Location:665 → 1007
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain

  8. XM_038459140.1 → XP_038315068.1  ataxin-2 isoform X3

    UniProtKB/TrEMBL
    A0A8C0THS8, A0A8I3Q8E2
    Conserved Domains (5) summary
    PHA03247
    Location:664 → 990
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:89 → 234
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
    pfam06741
    Location:144 → 205
    LsmAD; LsmAD domain
    pfam07145
    Location:646 → 660
    PAM2; Ataxin-2 C-terminal region
    pfam14438
    Location:3 → 76
    SM-ATX; Ataxin 2 SM domain
Nucleotide Protein
Heading Accession and Version

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