GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Sample GSM936087 Query DataSets for GSM936087
Status Public on May 24, 2012
Title Broad_Combined_NHEK
Sample type SRA
Source name NHEK
Organism Homo sapiens
Characteristics lab: Broad
lab description: Bernstein - Broad Institute
datatype: Combined
datatype description: Multi-assay Synthesis
cell: NHEK
cell organism: human
cell description: epidermal keratinocytes
cell karyotype: normal
cell lineage: ectoderm
cell sex: U
softwareversion: ChromHMM_ENCODEDynamicsPaper
Biomaterial provider Lonza
Growth protocol Keratinocyte_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer
Data processing
Submission date May 23, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL9052
Series (1)
GSE38163 Chromatin State Segmentation by HMM from ENCODE/Broad
Reanalysis of GSM733636
Reanalysis of GSM733655
Reanalysis of GSM733665
Reanalysis of GSM733671
Reanalysis of GSM733674
Reanalysis of GSM733686
Reanalysis of GSM733698
Reanalysis of GSM733701
Reanalysis of GSM733720
Reanalysis of GSM733726
Reanalysis of GSM733728
Reanalysis of GSM733740
BioSample SAMN02197539
Named Annotation GSM936087_hg19_wgEncodeBroadHmmNhekHMM.bed.gz
SRA SRX067387
SRA SRX067406
SRA SRX067416
SRA SRX067422
SRA SRX067425
SRA SRX067437
SRA SRX067449
SRA SRX067452
SRA SRX067471
SRA SRX067477
SRA SRX067479
SRA SRX067491

Supplementary file Size Download File type/resource
GSM936087_hg19_wgEncodeBroadHmmNhekHMM.bed.gz 5.8 Mb (ftp)(http) BED
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap