GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Sample GSM936082 Query DataSets for GSM936082
Status Public on May 24, 2012
Title Broad_Combined_GM12878
Sample type SRA
Source name GM12878
Organism Homo sapiens
Characteristics lab: Broad
lab description: Bernstein - Broad Institute
datatype: Combined
datatype description: Multi-assay Synthesis
cell: GM12878
cell organism: human
cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus
cell karyotype: normal
cell lineage: mesoderm
cell sex: F
softwareversion: ChromHMM_ENCODEDynamicsPaper
Biomaterial provider Coriell
Growth protocol GM12878_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer
Data processing
Submission date May 23, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL9052
Series (1)
GSE38163 Chromatin State Segmentation by HMM from ENCODE/Broad
Reanalysis of GSM733642
Reanalysis of GSM733664
Reanalysis of GSM733677
Reanalysis of GSM733679
Reanalysis of GSM733708
Reanalysis of GSM733736
Reanalysis of GSM733742
Reanalysis of GSM733752
Reanalysis of GSM733758
Reanalysis of GSM733767
Reanalysis of GSM733769
Reanalysis of GSM733771
Reanalysis of GSM733772
BioSample SAMN02197567
Named Annotation GSM936082_hg19_wgEncodeBroadHmmGm12878HMM.bed.gz
SRA SRX067393
SRA SRX067415
SRA SRX067428
SRA SRX067430
SRA SRX067459
SRA SRX067487
SRA SRX067493
SRA SRX067503
SRA SRX067509
SRA SRX067518
SRA SRX067520
SRA SRX067522
SRA SRX067523

Supplementary file Size Download File type/resource
GSM936082_hg19_wgEncodeBroadHmmGm12878HMM.bed.gz 5.3 Mb (ftp)(http) BED
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap