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Series GSE31223 Query DataSets for GSE31223
Status Public on Aug 06, 2011
Title Gene expression of polyoma middle T antigen induced mammary tumors [RNA_Seq : MOLF x PyMT]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Mouse genetic crosses were established between the PyMT model of metastatic breast cancer and MOLF strain. Tumors were harvested from the animals for gene expression analysis to identify genes and network modules associated with progression to distant metastatic disease.
Overall design 30 samples from the MOLF cross were assayed using Illumina next generation sequencers
Contributor(s) Hu Y, Hunter K
Citation(s) 22308418, 24322557
Submission date Aug 04, 2011
Last update date May 15, 2019
Contact name Ying Hu
Phone 240 276 5273
Organization name NIH
Department NCI/CCR
Street address 9609 Medical Center Dr.
City Rockville
State/province MD
ZIP/Postal code 20850
Country USA
Platforms (2)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (30)
GSM774011 MOLF backcross animal 3273
GSM774012 MOLF backcross animal 3427
GSM774013 MOLF backcross animal 3540
This SubSeries is part of SuperSeries:
GSE30866 Gene expression of polyoma middle T antigen induced mammary tumors
SRA SRP007956
BioProject PRJNA154115

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE31223_RAW.tar 7.5 Mb (http)(custom) TAR (of TXT)
GSE31223_processed_data.txt.gz 1.9 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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