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134 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter	Platform: GPL24247					HIC
GSE143293	Histone 1 deficiency drives lymphomagenesis through disruption of 3D chromatin architecture	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	53		HIC MTX TSV TXT SRA Run Selector	Matt Teater	Sep 02, 2020
GSE110061	Direct DNA crosslinking with CAP-C uncovers transcription-dependent chromatin organization at high resolution	Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens Mus musculus	76		BIGWIG HIC NARROWPEAK TXT SRA Run Selector	Youzhi Cheng	Aug 22, 2020
GSE153402	CTCF Mediates Dosage and Sequence-context-dependent Transcriptional Insulation through Formation of Local Chromatin Domains [Hi-C and PLAC-seq]	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14		HIC TXT SRA Run Selector	Bing Ren	Jul 06, 2020
GSE153403	CTCF Mediates Dosage and Sequence-context-dependent Transcriptional Insulation through Formation of Local Chromatin Domains	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	88		BW HIC TXT	Bing Ren	Jul 06, 2020
GSE150384	DNA Double-Strand Breaks Induce H2Ax Phosphorylation Domains in a Contact-Dependent Manner	Other	Mus musculus	32		BW HIC SRA Run Selector	Patrick Leonard Collins	May 13, 2020
GSE147843	ERa-binding super enhancers drive key mediators that convey uterine hormone responses	Other	Mus musculus	4		HIC TXT SRA Run Selector	Sylvia C Hewitt	Apr 29, 2020
GSE137274	A WIZ/Cohesin/CTCF complex anchors DNA loops to define gene expression and cell identity [Hi-C]	Other	Mus musculus	4		BEDPE HIC TXT SRA Run Selector	Jill Dowen	Apr 14, 2020
GSE140363	Defining the relative and combined contribution of CTCF and CTCFL to genomic regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	122		BED BEDGRAPH BROADPEAK BW CSV HIC NARROWPEAK SRA Run Selector	Nishana Mayilaadumveettil	Apr 14, 2020
GSE125656	Exonuclease combinations reduce noises in 3D genomics technologies	Other Third-party reanalysis	Mus musculus	27		HIC TXT SRA Run Selector	Qing Li	Apr 08, 2020
GSE120393	Polycomb Mediated Chromatin Organization Reveals Transcriptional Silencers Required for Embryonic Development	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	107		BIGWIG BROADPEAK FPKM_TRACKING HIC NARROWPEAK TXT SRA Run Selector	Chia-Lin Wei	Jan 07, 2020
GSE125595	RNA interactions are essential for proper CTCF function	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	24		BW CLOUPE HIC TXT SRA Run Selector	Ricardo Saldana-Meyer	Sep 12, 2019
GSE135465	Nucleome Dynamics during Retinal Development[Hi-C_Mm]	Other	Mus musculus	11		HIC SRA Run Selector	Beisi Xu	Sep 05, 2019
GSE125972	A distal super enhancer mediates estrogen-dependent mouse uterine–specific gene transcription of Insulin-like growth factor 1 (Igf1)	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	38		BIGWIG HIC TXT SRA Run Selector	Sylvia C Hewitt	May 08, 2019
GSE126362	Pax3 cooperates with Ldb1 to direct local chromosome architecture during lineage specification	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	60		BED HIC SRA Run Selector	Alessandro Magli	Apr 16, 2019