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Sample GSM1002655 Query DataSets for GSM1002655
Status Public on Sep 12, 2012
Title Duke_Combined_H1-hESC_wgEncodeOpenChromSynth
Sample type SRA
 
Source name H1-hESC
Organism Homo sapiens
Characteristics lab: Duke
lab description: Crawford - Duke University
datatype: Combined
datatype description: Multi-assay Synthesis
cell: H1-hESC
cell organism: human
cell description: embryonic stem cells
cell karyotype: normal
cell lineage: inner cell mass
cell sex: M
treatment: None
treatment description: No special treatment or protocol applies
composite: wgEncodeOpenChromSynth
labversion: 1.0
Biomaterial provider WiCell Research Institute
Treatment protocol None
Growth protocol missing
Extracted molecule genomic DNA
Extraction protocol Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromSynth
 
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer
 
Data processing http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromSynth
 
Submission date Sep 12, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platform ID GPL9052
Series (1)
GSE40833 DNaseI/FAIRE/ChIP Synthesis from ENCODE/OpenChrom(Duke/UNC/UTA)
Relations
Reanalysis of GSM816632
Reanalysis of GSM822274
Reanalysis of GSM822297
Reanalysis of GSM822300
Reanalysis of GSM864341
BioSample SAMN02197290
Named Annotation GSM1002655_hg19_wgEncodeOpenChromSynthH1hescPk.bed.gz
SRA SRX100890
SRA SRX102975
SRA SRX102996
SRA SRX102999
SRA SRX117785

Supplementary file Size Download File type/resource
GSM1002655_hg19_wgEncodeOpenChromSynthH1hescPk.bed.gz 8.0 Mb (ftp)(http) BED
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
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