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Series GSE247569 Query DataSets for GSE247569
Status Public on Jun 03, 2024
Title The impact of HPV8 on Lrig1+ and CD34+ hair follicle keratinocyte stem cell populations
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Despite epidermal turnover, the skin is host to a complex array of microbes including viruses, such as the human papillomavirus (HPV), which must infect and manipulate skin keratinocyte stem cells (KSC) to survive. This crosstalk between the virome and KSC populations remains largely unknown. Here, we investigated the effect of HPV8 on KSCs using various mouse models. We observed that the HPV8 early region gene E6 specifically caused Lrig1+hair follicle junctional zone KSC proliferation and expansion, which would facilitate viral transmission. Within Lrig1+KSCs specifically, HPV8 E6 bound intracellular p300 to phosphorylate the STAT3 transcriptional regulatory node. This induces a transcriptional switch from TAp63 to ΔNp63 expression, resulting in expansion of KSC into the overlying epidermis. HPV8 was associated with 70% of human actinic keratoses (AK). Together these results redefine human AK as an expansion of KSC, which lack protecting melanosomes and are thus susceptible to sun-light-induced malignant transformation.
 
Overall design To determine why HPV8 induced selective proliferation of the Lrig1+hair follicle junctional zone keratinocyte stem cells, but not other keratinocyte stem cells, we undertook a transcriptomic analysis of adjacent stem cell populations defined by Lrig1 and CD34 expression in adult mice. Both Lrig1+and CD34+flow-sorted keratinocytes were isolated from dorsal back skin of individual HPV8-CERtg and WT mice. We then performed gene expression profiling analysis on this RNA-seq data.
Web link http://10.1172/jci.insight.177898
 
Contributor(s) Patel GK, Gibbs A, Morgan HJ
Citation(s) 38916963
BioProject PRJNA1037145
Submission date Nov 13, 2023
Last update date Sep 02, 2024
Contact name Girish K Patel
E-mail(s) patelgk@cardiff.ac.uk
Organization name Cardiff University
Street address Maindy Road
City Cardiff
ZIP/Postal code CF244HQ
Country United Kingdom
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (12)
GSM7893040 HPV8 Lrig1+.Mouse.RNA.Seq.Sample.1
GSM7893041 HPV8 Lrig1+.Mouse.RNA.Seq.Sample.2
GSM7893042 HPV8 Lrig1+.Mouse.RNA.Seq.Sample.3
This SubSeries is part of SuperSeries:
GSE248056 The impact of HPV8 on hair follicle stem cell populations

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE247569_normalised.reads.txt.gz 1.6 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA

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