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Series GSE191280 Query DataSets for GSE191280
Status Public on Jun 01, 2023
Title RNA-seq profiling of tissue from deer mouse embryo tails
Organisms Peromyscus maniculatus bairdii; Peromyscus maniculatus nubiterrae
Experiment type Expression profiling by high throughput sequencing
Summary We used RNA-seq to compare transcriptional profiles from the embryonic tails from E12.5–E15.5 Peromyscus maniculatus. Samples are from two ecotypes, forest (P.m.nubiterrae) and prairie (P.m.bairdii) with different numbers of caudal vertebrae.
 
Overall design Embryonic tail RNA expression profiles from E12.5–E15.5 P. m. nubiterrae (n = 18) and P. m. bairdii (n = 17)
 
Contributor(s) Kingsley EP
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Submission date Dec 20, 2021
Last update date Jun 01, 2023
Contact name Evan Kingsley
E-mail(s) evan_kingsley@hms.harvard.edu
Organization name Harvard Medical School
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (2)
GPL31116 Illumina HiSeq 2500 (Peromyscus maniculatus nubiterrae)
GPL31117 Illumina HiSeq 2500 (Peromyscus maniculatus bairdii)
Samples (35)
GSM5742960 nubiterrae_forest_early_01
GSM5742961 nubiterrae_forest_early_02
GSM5742962 nubiterrae_forest_early_03
Relations
BioProject PRJNA790846

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE191280_RSEM.isoform.counts.matrix.gz 1.2 Mb (ftp)(http) MATRIX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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