|
| Status |
Public on Oct 05, 2021 |
| Title |
C-FOS-driven basal to squamous cell transition |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
34610301 |
| |
| Submission date |
Mar 05, 2021 |
| Last update date |
Oct 19, 2021 |
| Contact name |
Anthony Oro |
| Organization name |
Stanford University
|
| Department |
Dermatology
|
| Street address |
269 Campus Drvie
|
| City |
Stanford |
| State/province |
CA |
| ZIP/Postal code |
94305 |
| Country |
USA |
| |
|
| Platforms (4)
|
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
| GPL21103 |
Illumina HiSeq 4000 (Mus musculus) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
|
| Samples (47)
|
|
| This SuperSeries is composed of the following SubSeries:
|
| GSE161009 |
Chromatin accessibility changes in experimentally-induced basal to squamous cell carcinoma transition (BST) |
| GSE166593 |
Transcriptional changes in experimentally-induced basal to squamous cell carcinoma transition (BST) [ASZ_RasV12_TGFbR1_RNAseq] |
| GSE166595 |
Transcriptional changes in experimentally-induced basal to squamous cell carcinoma transition (BST) [ASZ_cFOS_RNAseq] |
| GSE166596 |
Transcriptional changes in experimentally-induced basal to squamous cell carcinoma transition (BST) upon treatment with small molecule inhibitors [ASZ_RNAseq_inhibitor] |
| GSE168374 |
DNA binding profile of c-FOS in experimentally-induced basal to squamous cell carcinoma transition (BST) |
| GSE178914 |
Chromatin accessibility changes in experimentally-induced basal to squamous cell carcinoma transition (BST) upon EGFR/MAPK inhibitor treatments [ASZ_ATACseq_inhibitor] |
|
| Relations |
| BioProject |
PRJNA707051 |
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