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Series GSE161056 Query DataSets for GSE161056
Status Public on May 03, 2021
Title ATAC-seq, ChIP-seq and RNA-seq studies in myoblasts lacking Hira
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 34103504
Submission date Nov 08, 2020
Last update date Jun 15, 2021
Contact name Joana Esteves de Lima
E-mail(s) joanaesteveslima@gmail.com
Organization name INSERM
Department IMRB INSERM U955
Lab Team RELAIX
Street address 8 rue du general sarrail
City Creteil
ZIP/Postal code 94000
Country France
 
Platforms (2)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (20)
GSM4889011 C2C12_ATAC_rep1
GSM4889012 C2C12_ATAC_rep2
GSM4889013 Hira_KO_ATAC_rep1
This SuperSeries is composed of the following SubSeries:
GSE161053 Genome-wide changes in chromatin accessibility in myoblasts lacking Hira [ATAC-seq]
GSE161054 Genome-wide chromatin state in myoblasts lacking Hira [ChIP-seq]
GSE161055 Analysis of the transcriptomic changes of myoblasts lacking Hira [RNA-seq]
Relations
BioProject PRJNA675381

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE161056_RAW.tar 3.5 Gb (http)(custom) TAR (of BIGWIG, BW, TXT)
SRA Run SelectorHelp

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