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Series GSE114256 Query DataSets for GSE114256
Status Public on Dec 23, 2019
Title Polymorphisms in mitochondrial DNA genes coding for subunits in complex I differentially control lifespan and ageing-related pathways in mice.
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Mitochondrial complex I, the largest enzyme complex of the mitochondrial oxidative phosphorylation machinery, has been proposed to contribute to variety of age-related pathological alterations as well as longevity. The enzyme complex-consisting proteins are encoded by both nuclear- (nDNA) and mitochondrial DNA (mtDNA). While some association studies of mtDNA-encoded complex I genes and lifespan in humans have been reported, experimental evidence and functional consequence of such variants are limited to studies using invertebrate models. Here, we present experimental evidence that a homoplasmic mutation in mitochondrially encoded complex I gene, mt-Nd2, modulates lifespan by altering cellular tryptophan levels and consequently ageing-related pathways in mice. A conplastic mouse strain carrying a mutation at m.4738C>A in mt-Nd2 lived significantly shorter than the controls. The same mutation led to higher susceptibility to glucose intolerance induced by high fat diet feeding. These phenotypes were not observed in mice carrying a mutation in another mtDNA-encoded complex I gene, mt-Nd5, suggesting functional relevance of particular mutations in complex I to ageing and age-related diseases.
 
Overall design The transcriptomes of liver obtained from C57BL/6J-mtALR (mutation in mt-Nd2 gene) was compared with those from C57BL/6J-mtBPL (mutation in mt-Nd5 gene) by RNAseq.
 
Contributor(s) Hirose M, Ibrahim SM, Busch H
Citation(s) 31337008
Submission date May 09, 2018
Last update date Dec 25, 2019
Contact name Hauke Busch
E-mail(s) hauke.busch@uni-luebeck.de
Phone +49-451-3101-8470
Organization name University of Lübeck
Department Lübeck Institute of Experimental Dermatology
Street address Ratzeburger Allee 160
City Lübeck
State/province Schleswig-Holstein
ZIP/Postal code 23538
Country Germany
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (11)
GSM3138529 C57BL/6J-mtALR/J 1
GSM3138530 C57BL/6J-mtALR/J 2
GSM3138531 C57BL/6J-mtALR/J 3
Relations
BioProject PRJNA470677
SRA SRP145104

Download family Format
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Supplementary file Size Download File type/resource
GSE114256_RAW.tar 12.5 Mb (http)(custom) TAR (of TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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