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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Dec 13, 2016 |
| Title |
Illumina MiniSeq (Homo sapiens) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
Homo sapiens |
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| Submission date |
Dec 13, 2016 |
| Last update date |
Jan 02, 2019 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (949)
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GSM2427892, GSM2427895, GSM2427897, GSM2427899, GSM2427902, GSM2886793
GSM2886794, GSM2886795, GSM2886796, GSM2886797, GSM2886798, GSM2886799, GSM2886800, GSM2886801, GSM2886802, GSM2886803, GSM2886804, GSM2886805, GSM2886806, GSM2886807, GSM2886808, GSM2886809, GSM2886810, GSM2990216, GSM2990217, GSM2990218, GSM3082674, GSM3082675, GSM3082676, GSM3082677, GSM3082678, GSM3082679, GSM3082680, GSM3143008, GSM3227997, GSM3585511, GSM3585512, GSM3585513, GSM3585514, GSM3585515, GSM3585516, GSM3585517, GSM3585518, GSM3585519, GSM3585520, GSM3585521, GSM3585522, GSM3585523, GSM3585524, GSM3585525, GSM3839716, GSM3839717, GSM3839718, GSM3839719, GSM3839720, GSM3839721, GSM3839722, GSM3839723, GSM3839724, GSM3839725, GSM3839726, GSM3839727, GSM3839728, GSM3839729, GSM3839730, GSM3839731, GSM3839732, GSM3839733, GSM3839734, GSM3839735, GSM3839736, GSM3839737, GSM3839738, GSM3839739, GSM3839740, GSM3839741, GSM3839742, GSM3839743, GSM3839744, GSM3839745, GSM3839746, GSM3839747, GSM3839748, GSM3839749, GSM3839750, GSM3839751, GSM3839752, GSM3839753, GSM3839754, GSM3839755, GSM3839756, GSM3839757, GSM3839758, GSM3886381, GSM3886382, GSM3886383, GSM3892823, GSM3892824, GSM4046316, GSM4046317, GSM4046318, GSM4046319, GSM4046320, GSM4046321, GSM4194737, GSM4194738, GSM4194739, GSM4194740, GSM4194741, GSM4194756, GSM4194757, GSM4194758, GSM4194759, GSM4194760, GSM4194761, GSM4194762, GSM4194763, GSM4206371, GSM4206373, GSM4206379, GSM4206383, GSM4206387, GSM4206392, GSM4274807, GSM4274808, GSM4274809, GSM4274810, GSM4297089, GSM4297090, GSM4297091, GSM4297092, GSM4297093, GSM4297094, GSM4297095, GSM4297096, GSM4297097, GSM4297098, GSM4297099, GSM4297100, GSM4297101, GSM4297102, GSM4297103, GSM4297104, GSM4297105, GSM4297106, GSM4506628, GSM4506629, GSM4506630, GSM4506631, GSM4506632, GSM4506633, GSM4506634, GSM4543833, GSM4543834, GSM4543835, GSM4543836, GSM4543837, GSM4543838, GSM4543839, GSM4543840, GSM4543841, GSM4543842, GSM4543843, GSM4543844, GSM4543845, GSM4543846, GSM4553889, GSM4553890, GSM4553892, GSM4553893, GSM4618481, GSM4618482, GSM4618483, GSM4618484, GSM4618485, GSM4618486, GSM4618487, GSM4618488, GSM4671065, GSM4671066, GSM4671067, GSM4671068, GSM4671069, GSM4671070, GSM4684637, GSM4684638, GSM4684639, GSM4684640, GSM4684641, GSM4684642, GSM4684643, GSM4684644, GSM4684645, GSM4684646, GSM4684647, GSM4684648, GSM4684649, GSM4684650, GSM4684651, GSM4684652, GSM4684653, GSM4684654, GSM4684655, GSM4684656, GSM4684657, GSM4684658, GSM4684659, GSM4684660, GSM4684661, GSM4684662, GSM4684663, GSM4684664, GSM4684665, GSM4684666, GSM4684667, GSM4684668, GSM4684669, GSM4684670, GSM4684671, GSM4684672, GSM4684673, GSM4684674, GSM4684675, GSM4684676, GSM4684677, GSM4725614, GSM4725615, GSM4725616, GSM4725617, GSM4725618, GSM4725619, GSM4725620, GSM4725621, GSM4725622, GSM4725623, GSM4725624, GSM4725625, GSM4725626, GSM4725627, GSM4725628, GSM4725629, GSM4725630, GSM4725631, GSM4732255, GSM4732256, GSM4732257, GSM4732258, GSM4732259, GSM4732260, GSM4735309, GSM4735310, GSM4765013, GSM4765014, GSM4765015, GSM4765016, GSM4765017, GSM4765018, GSM4765019, GSM4805554, GSM4805555, GSM4805556, GSM4805557, GSM4805559, GSM4805561, GSM4805562, GSM4805564, GSM4805566, GSM4805567, GSM4805568, GSM4970381, GSM4982504, GSM4982505, GSM4982506, GSM4982507, GSM4982508, GSM4982509, GSM4982510, GSM4982511, GSM4982512, GSM4982513, GSM4982514, GSM4982515, GSM4982516, GSM4982517, GSM4982518, GSM4982519, GSM4982520, GSM4982521, GSM4982522, GSM4982523, GSM4982524, GSM4982525, GSM4982526, GSM4982527, GSM4982528, GSM4982529, GSM4982530, GSM4982531, GSM4982532, GSM4982533, GSM4982534, GSM4982535, GSM4982536, GSM4982537, GSM4982538, GSM4982539, GSM4982540, GSM4982541, GSM4982542, GSM4982543, GSM4982544, GSM4982545, GSM4982546, GSM4982547, GSM4982548, GSM4982549, GSM4982550, GSM4982551, GSM4982552, GSM4982553, GSM4982554, GSM4982555, GSM4982556, GSM4982557, GSM4982558, GSM4982559, GSM4982560, GSM4982561, GSM4982562, GSM4982563, GSM4982564, GSM4982565, GSM4982566, GSM4982567, GSM4982568, GSM4982569, GSM4982570, GSM4982571, GSM4982572, GSM4982573, GSM4982574, GSM4982575, GSM4982576, GSM4982577, GSM4982578, GSM4982579, GSM4982580, GSM4982581, GSM4982582, GSM4982583, GSM4982584, GSM4982585, GSM4982586, GSM4982587, GSM4982588, GSM4982589, GSM4982590, GSM4982591, GSM4982592, GSM4982593, GSM4982594, GSM4982595, GSM4982596, GSM4982597, GSM4982598, GSM4982599, GSM4982600, GSM4982601, GSM4982602, GSM4982603, GSM4982604, GSM4982605, GSM4982606, GSM4982607, GSM4982608, GSM4982609, GSM4982610, GSM4982611, GSM4982612, GSM4982613, GSM4982614, GSM4982615, GSM4982616, GSM4982617, GSM4982618, GSM4982619, GSM4982620, GSM4982621, GSM4982622, GSM4982623, GSM4982624, GSM4982625, GSM4982626, GSM4982627, GSM4982628, GSM4982629, GSM4982630, GSM4982631, GSM4982632, GSM4982633, GSM4982634, GSM4982635, GSM4982636, GSM4982637, GSM4982638, GSM4982639, GSM4982640, GSM4982641, GSM4982642, GSM4982643, GSM4982644, GSM4982645, GSM4982646, GSM4982647, GSM4982648, GSM4982649, GSM4982650, GSM4982651, GSM4982652, GSM4982653, GSM4982654, GSM4982655, GSM4982656, GSM4982657, GSM4982658, GSM4982659, GSM4982660, GSM4982661, GSM4982662, GSM4982663, GSM4982664, GSM4982665, GSM4982666, GSM4982667, GSM4982668, GSM4982669, GSM4982670, GSM4982671, GSM4982672, GSM4982673, GSM4982674, GSM4982675, GSM4982676, GSM4982677, GSM4982678, GSM4982679, GSM4982680, GSM4982681, GSM4982682, GSM4982683, GSM4982684, GSM4982685, GSM4982686, GSM4982687, GSM4982688, GSM4982689, GSM4982720, GSM4982721, GSM4982722, GSM4982723, GSM4982724, GSM4982725, GSM4982726, GSM4982727, GSM4982728, GSM4982729, GSM4982730, GSM4982731, GSM4982732, GSM4982733, GSM4982734, GSM4982735, GSM4982736, GSM4982737, GSM4982738, GSM4982739, GSM4982740, GSM4982741, GSM4982742, GSM4982743, GSM4982744, GSM4982745, GSM4982746, GSM4982747, GSM4982748, GSM4982749, GSM4982750, GSM4982751, GSM4982752, GSM4982753, GSM4982754, GSM4982755, GSM4982756, GSM4982757, GSM4982758, GSM4982759, GSM4982760, GSM4982761, GSM4982762, GSM4982763...
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| Series (85)
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| GSE92345 |
Systematic mapping of RNA-chromatin interactions in vivo |
| GSE107304 |
Increasing miRNA sequencing accuracy using an RNA circularization approach |
| GSE108012 |
RNA-seq of induced brain microvascular endothelial cells from cerebral childhood adrenoleukodystrophy patients and wild-type controls |
| GSE112729 |
SALL4 Crud ChIP sequencing-WT and RNA-seq of SNU398 cells treated with therapeutic SALL4 peptides |
| GSE116323 |
Bulk RNA-seq analysis of HUVEC cell cultures with Cerebral Cavernous Malformation (CCM) protein knockdown |
| GSE125941 |
FET fusion oncoprotein-regulated genes in HT1080 cell line |
| GSE132048 |
Linking Indirect Effects of Cytomegalovirus to Modulation of Monocyte Innate Immune Function |
| GSE132685 |
Master transcription factors form interconnected circuitry and orchestrate transcriptional networks in esophageal adenocarcinoma [4C-Seq] |
| GSE132686 |
Master transcription factors form interconnected circuitry and orchestrate transcriptional networks in esophageal adenocarcinoma |
| GSE132813 |
Lineage-Specific Epigenomic and Genomic Activation of Oncogene HNF4A Promotes Gastrointestinal Adenocarcinomas |
| GSE136332 |
Zinc finger protein SALL4 functions through an AT-rich motif to regulate gene expression |
| GSE141083 |
RNA LEVER mediates long-range regulation of ε-globin by keeping PRC2 in check |
| GSE141550 |
Co-opted transposons help perpetuate conserved higher-order chromosomal structures |
| GSE143803 |
SREBF1 coordinates with master transcription factors in regulating lipid metabolism and cancer-promoting pathways in squamous cell carcinoma |
| GSE144352 |
Targeted RNASeq using a custom panel of metabolic genes |
| GSE144354 |
Metformin and 2-Deoxyglucose Collaboratively Suppress Human CD4+ T Cell Inflammatory Functions and Activation-Induced Metabolic Reprogramming |
| GSE149650 |
Genes regulated by JAK1/2 inhibitor ruxolitinib and myxoid liposarcoma-specific fusion onccogene FUS-DDIT3 in HT1080 cells. |
| GSE150234 |
Natural display of nuclear-encoded RNA on the cell surface and its impact on cell interaction [Surface-FISHSeq] |
| GSE150237 |
Natural display of nuclear-encoded RNA on the cell surface and its impact on cell interaction |
| GSE150617 |
Nucleosome conformation dictates the histone code |
| GSE151326 |
Large-scale evaluation of renewable PRCP monoclonal antibodies by ChIP-exo, STORM, and … |
| GSE152590 |
RNA seq data of CD8+ T cells in peripheral blood lymphocytes from melanoma and lung cancer patients |
| GSE154430 |
The SARS-CoV-2 RNA-protein interactome in infected human cells |
| GSE154938 |
Glucose-6-Phosphate Dehydrogenase as a Prognostic Predictor Correlates with the Tumor Immune Activity Including Programmed Death Ligand-1 Expression in Merkel Cell Carcinoma |
| GSE156150 |
Paired Imaging and Sequencing of Protein-DNA Interactions in Single Human Cells Using microDamID |
| GSE156486 |
IER5 is required for Notch-mediated induction of squamous cell differentiation [ChIP-seq RBPJ & MAML1] |
| GSE156488 |
IER5 is required for Notch-mediated induction of squamous cell differentiation |
| GSE156630 |
Silencing of unintegrated HIV-1 by SLF2 and the SMC5/6 complex |
| GSE158692 |
Single-cell sequencing of colorectal cancer liver metastases |
| GSE163024 |
CRISPRa screen for drivers of COL7A1 expression in keratinocytes |
| GSE163607 |
Manipulation of the human tRNA pool reveals distinct tRNA sets that act in cellular proliferation or cell cycle arrest [genomic_tRNAseq] |
| GSE163608 |
Manipulation of the human tRNA pool reveals distinct tRNA sets that act in cellular proliferation or cell cycle arrest [sgRNA-seq] |
| GSE163609 |
Manipulation of the human tRNA pool reveals distinct tRNA sets that act in cellular proliferation or cell cycle arrest [tRNA-seq] |
| GSE163611 |
Manipulation of the human tRNA pool reveals distinct tRNA sets that act in cellular proliferation or cell cycle arrest. |
| GSE166836 |
Parallel characterization of cis-Regulatory Elements for Multiple Genes using CRISPRpath [Cut&Tag] |
| GSE166839 |
Parallel characterization of cis-Regulatory Elements for Multiple Genes using CRISPRpath |
| GSE167455 |
Metronomic Radiotherapy Reverses Tumor Immune Desertification and Resistance to Immunotherapy |
| GSE169742 |
Integrated Profiling Reveals Low Dose Radiotherapy Reverses Tumor Immune Desertification and Resistance to Immunotherapy |
| GSE171678 |
Systematic discovery and perturbation of regulatory genes in human T cells reveals the architecture of immune networks [Amplicon] |
| GSE171737 |
Systematic discovery and perturbation of regulatory genes in human T cells reveals the architecture of immune networks |
| GSE173086 |
Developing RT-LAMP Assays for Detection of SARS-CoV-2 in Saliva |
| GSE178307 |
Exosomal-microRNA transcriptome profiling of Parental and CSC-like MDA-MB-231 cells in response to cisplatin treatment |
| GSE178310 |
Exosomal-microRNA transcriptome profiling of Parental and CSC-like MDA-MB-231 cells in response to cisplatin treatment |
| GSE179071 |
PM01183 on SCLC cell lines (RNA-Seq) |
| GSE179074 |
PM01183 on SCLC cell lines |
| GSE181113 |
Genome surveillance through repression of intronless mobile elements by the HUSH complex |
| GSE185131 |
EWS/FLI mediated reprogramming of 3D chromatin promotes an altered transcriptional state in Ewing sarcoma (4C) |
| GSE185132 |
EWS/FLI mediated reprogramming of 3D chromatin promotes an altered transcriptional state in Ewing sarcoma |
| GSE185404 |
Genome-wide essential gene identification for lysenin-induced cell death using CRISPR/CAS9 screening system |
| GSE190587 |
Targeting refractory mantle cell lymphoma for imaging and therapy using C-X-C chemokine receptor type 4 radioligands |
| GSE192541 |
High-throughput analysis of ANRIL circRNA isoforms in human pancreatic islets |
| GSE192641 |
Skin programming of inflammatory responses to Staphylococcus aureus is compartmentalised within epidermal keratinocytes differentiation status. |
| GSE201205 |
3D chromatin organization involving MEIS1 factor in the cis-regulatory landscape of GJB2 |
| GSE203349 |
High-yield genome engineering in primary cells using a hybrid ssDNA repair template and small-molecule cocktails [Ampli-seq] |
| GSE205588 |
Machine learning predictions of MHC-II specificities reveal alternative binding mode of class II epitopes |
| GSE210888 |
Enhancer retargeting at the PAX5/ZCCHC7 locus |
| GSE218305 |
Targeted high throughput mutagenesis of the human spliceosome reveals its in vivo operating principles [editing] |
| GSE218307 |
Targeted high throughput mutagenesis of the human spliceosome reveals its in vivo operating principles |
| GSE218394 |
Telomere-to-mitochondria signaling by ZBP1 mediates replicative crisis (RIP-Seq) |
| GSE218396 |
Telomere-to-mitochondria signaling by ZBP1 mediates replicative crisis |
| GSE225984 |
Novel TCR sequencing and cloning methods for sensitive and quantitative interrogation of repertoires and rapid isolation of tumor-reactive TCRs |
| GSE229861 |
Tumor-reactive T cell clonotype dynamics underlying clinical response to TIL therapy in melanoma |
| GSE229879 |
CRISPR gene editing, cardiac disease modelling and transcriptomics interpretation of a novel GATA4 patient genetic variant |
| GSE230773 |
Gene expression profiles associated with myxoid liposarcoma scaffold culture compared to monolayer growth and effect of fusion oncogene FUS-DDIT3 |
| GSE234352 |
Tumor-reactive T cell clonotype dynamics underlying clinical response to TIL therapy in melanoma [TCR-Seq] |
| GSE240952 |
Molecular and functional landscape of malignant serous effusions for precision oncology [MSE_baseline] |
| GSE240953 |
Molecular and functional landscape of malignant serous effusions for precision oncology |
| GSE241010 |
ZNF683 marks a CD8+ T cell population associated with anti-tumor immunity following anti-PD-1 therapy for Richter syndrome [CUT&RUN] |
| GSE241091 |
ZNF683 marks a CD8+ T cell population associated with anti-tumor immunity following anti-PD-1 therapy for Richter syndrome |
| GSE241833 |
COSMOS: A Platform for real-time morphology-based, label-free cell sorting using deep learning (bulk RNA-Seq) |
| GSE241834 |
COSMOS: A Platform for real-time morphology-based, label-free cell sorting using deep learning (scRNA-Seq) |
| GSE241835 |
COSMOS: A Platform for real-time morphology-based, label-free cell sorting using deep learning (targeted RNA-Seq) |
| GSE241837 |
COSMOS: A Platform for real-time morphology-based, label-free cell sorting using deep learning |
| GSE248715 |
G9a/GLP Inhibition Promotes T Cell Development from Pluripotent Stem Cells [RNA-Seq] |
| GSE248718 |
G9a/GLP Inhibition Promotes T Cell Development from Pluripotent Stem Cells |
| GSE248875 |
SHIFTR enables the unbiased identification of proteins bound to specific RNA regions in live cells |
| GSE250291 |
G-quadruplexes within the SVA retrotransposon modulate TAF1 gene expression in X-linked Dystonia Parkinsonism [ChIP-seq] |
| GSE250295 |
G-quadruplexes within the SVA retrotransposon modulate TAF1 gene expression in X-linked Dystonia Parkinsonism |
| GSE252651 |
Deubiquitinating enzyme mutagenesis screens identify a USP43 driven HIF-1 transcriptional response [CRISPR] |
| GSE252655 |
Deubiquitinating enzyme mutagenesis screens identify a USP43 driven HIF-1 transcriptional response |
| GSE254080 |
TAF2 condensation in nuclear speckles links basal transcription factor TFIID to RNA splicing [CUT&RUN] |
| GSE254081 |
TAF2 condensation in nuclear speckles links basal transcription factor TFIID to RNA splicing |
| GSE262710 |
Identifying SETBP1 haploinsufficiency molecular pathways to improve patient diagnosis using induced pluripotent stem cells and neural disease modelling. |
| GSE269769 |
8-Oxoguanine DNA glycosylase 1 hijacked by nucleoprotein conceals guanine oxidation in respiratory syncytial virus RNA |
| GSE272315 |
RNA binding by Periphilin plays an essential role in initiating silencing by the HUSH complex |
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| Supplementary data files not provided |
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