GEO help: Mouse over screen elements for information.
Status
Public on Apr 22, 2005
Title
Dictyostelium discoideum cDNA Microarray 6000
Technology type
spotted DNA/cDNA
Distribution
non-commercial
Organism
Dictyostelium discoideum
Description
Spotted cDNAs array on glass.
Web link
http://www.uni-koeln.de/med-fak/biochemie/transcriptomics/ Citation(s)
16469056 Submission date
Apr 19, 2005
Last update date
Sep 06, 2013
Contact name
Ludwig Eichinger
E-mail(s)
ludwig.eichinger@uni-koeln.de Phone
+49 221 478 6928
Organization name
Institute for Biochemistry 1
Lab
AG Eichinger
Street address
Joseph-Stelzmann-Strasse 52
City
Cologne
ZIP/Postal code
50931
Country
Germany
Samples (104)
GSM185476 , GSM188351 , GSM188353 , GSM188454 , GSM188455 , GSM188456
GSM188457 ,
GSM188458 ,
GSM517135 ,
GSM517971 ,
GSM518023 ,
GSM518024 ,
GSM518042 ,
GSM518087 ,
GSM518103 ,
GSM518104 ,
GSM518105 ,
GSM518106 ,
GSM518107 ,
GSM518108 ,
GSM518109 ,
GSM518110 ,
GSM518111 ,
GSM518112 ,
GSM518303 ,
GSM518304 ,
GSM518305 ,
GSM518306 ,
GSM518307 ,
GSM518308 ,
GSM518309 ,
GSM518310 ,
GSM518315 ,
GSM518326 ,
GSM518327 ,
GSM518328 ,
GSM518329 ,
GSM518330 ,
GSM518331 ,
GSM518332 ,
GSM518347 ,
GSM518348 ,
GSM518349 ,
GSM518350 ,
GSM518365 ,
GSM518366 ,
GSM518372 ,
GSM518376 ,
GSM518377 ,
GSM518378 ,
GSM518379 ,
GSM518380 ,
GSM518381 ,
GSM1220865 ,
GSM1220866 ,
GSM1220867 ,
GSM1220868 ,
GSM1225800 ,
GSM1225804 ,
GSM1225806 ,
GSM1225808 ,
GSM1226562 ,
GSM1226563 ,
GSM1226564 ,
GSM1226565 ,
GSM1226566 ,
GSM1226567 ,
GSM1226568 ,
GSM1226569 ,
GSM1226570 ,
GSM1226571 ,
GSM1226572 ,
GSM1226573 ,
GSM1226574 ,
GSM1226575 ,
GSM1226576 ,
GSM1226577 ,
GSM1226578 ,
GSM1226579 ,
GSM1226580 ,
GSM1233368 ,
GSM1233369 ,
GSM1233370 ,
GSM1233371 ,
GSM1233372 ,
GSM1233373 ,
GSM1233374 ,
GSM1233375 ,
GSM1233376 ,
GSM1233377 ,
GSM1233378 ,
GSM1233379 ,
GSM1233380 ,
GSM1233381 ,
GSM1233382 ,
GSM1233383 ,
GSM1233384 ,
GSM1233385 ,
GSM1233386 ,
GSM1233387 ,
GSM1233388 ,
GSM1233389 ,
GSM1233390 ,
GSM1233391 Series (18)
GSE7804 A G Protein-Coupled Receptor with a Lipid Kinase Domain Is Involved in Cell-Density Sensing.
GSE20632 Differential Expression upon infection with Salmonella typhimurium (t0)
GSE20640 Differential Expression upon infection with Salmonella typhimurium (t1)
GSE20642 Differential Expression upon infection with Salmonella typhimurium (t2)
GSE20644 Differential Expression upon infection with Salmonella typhimurium (t3)
GSE20648 Investigation of differential expression: Differentiating cells vs Salmonella infected cells (t6)
GSE20651 Investigation of differential expression: Differentiating cells vs Salmonella infected cells (t3)
GSE20688 Salmonella infected Dictyostelium discoideum
GSE50536 Differential expression of Dictyostelium discoideum AX2 upon infection with wt L. pneumophila JR32 vs. the L. pneumophila delta DotA mutant 24h p.i.
GSE50651 Differential expression of Dictyostelium discoideum AX2 upon infection with wt L. pneumophila JR32 vs. L. hackeliae 24h p.i.
GSE50680 Dictyostelium transcriptional host cell response upon infection with Legionella
GSE50696 Differential expression of Dictyostelium discoideum AX2 upon infection with wt L. pneumophila JR32 vs. uninfected 24h p.i. (comparison experiment)
GSE50961 Differential expression of Dictyostelium discoideum AX2 upon infection with wt L. pneumophila JR32 vs. uninfected 6h p.i. (timecourse experiment)
GSE50962 Differential expression of Dictyostelium discoideum AX2 upon infection with wt L. pneumophila JR32 vs. uninfected 3h p.i. (timecourse experiment)
GSE50963 Differential expression of Dictyostelium discoideum AX2 upon infection with wt L. pneumophila JR32 vs. uninfected 1h p.i. (timecourse experiment)
GSE50964 Differential expression of Dictyostelium discoideum AX2 upon infection with wt L. pneumophila JR32 vs. uninfected 24h p.i. (timecourse experiment)
GSE50965 Differential expression of Dictyostelium discoideum AX2 upon infection with wt L. pneumophila JR32 vs. uninfected 48h p.i. (timecourse experiment)
GSE51185 Differential expression of Dictyostelium discoideum AX2 upon infection with wt L. pneumophila JR32 vs. uninfected (timecourse experiments)
Data table header descriptions ID GB_ACC/EST GenBank accession number of known genes or EST identifier for clones from the Japanese Dictyostelium discoideum cDNA project: http://dictycdb.biol.tsukuba.ac.jp/cDNAproject.html
DESCRIPTION Descriptive gene name for genes, Contigs for ESTs, descriptions for controls
DDB dictyBase id, corresponding gene prediction or curated model. NO HIT or NO OVERLAP if there is no corresponding gene prediction or curated model for this gene
BLOCK Number of subarray
COLUMN Column within subarray
ROW Row within subarray
LENGTH Sequence length
GB_ACC GenBank accession number
CLONE_ID SPOT_ID
Data table ID GB_ACC/EST DESCRIPTION DDB BLOCK COLUMN ROW LENGTH GB_ACC CLONE_ID SPOT_ID 1
X03281
05960 act-A8-20
DDB0216213
1
1
1
1131
X03281 2
X03281
05960 act-A8-20
DDB0216213
1
2
1
1131
X03281 3
SLD387
00948 Contig-U16412-1/ SLD387
DDB0184362,DDB0184362
1
3
1
1800
SLD387
4
SLD387
00948 Contig-U16412-1/ SLD387
DDB0184362,DDB0184362
1
4
1
1800
SLD387
5
SLE769
01172 Contig-U11114-1/ SLE769
DDB0187592
1
5
1
1300
SLE769
6
SLE769
01172 Contig-U11114-1/ SLE769
DDB0187592
1
6
1
1300
SLE769
7
SLH749
01492 Contig-U15669-1/ SLH749
DDB0203974
1
7
1
1300
SLH749
8
SLH749
01492 Contig-U15669-1/ SLH749
DDB0203974
1
8
1
1300
SLH749
9
SLK351
01716 Contig-U13875-1/ SLK351
DDB0217172,DDB0217172
1
9
1
1700
SLK351
10
SLK351
01716 Contig-U13875-1/ SLK351
DDB0217172,DDB0217172
1
10
1
1700
SLK351
11
SSA668
01940 Contig-U12250-1/ SSA668
DDB0219227
1
11
1
800
SSA668
12
SSA668
01940 Contig-U12250-1/ SSA668
DDB0219227
1
12
1
800
SSA668
13
SSC305
02264 Contig-U04686-1/ SSC305
DDB0201636
1
13
1
695
SSC305
14
SSC305
02264 Contig-U04686-1/ SSC305
DDB0201636
1
14
1
695
SSC305
15
05961 25 % DMSO
05961 25 % DMSO
1
15
1
25 % DMSO
16
05961 25 % DMSO
05961 25 % DMSO
1
16
1
25 % DMSO
17
emp
emp
1
17
1
emp
18
emp
emp
1
18
1
emp
19
X03281
05959 act-A8-5
DDB0216213
1
1
2
1131
X03281 20
X03281
05959 act-A8-5
DDB0216213
1
2
2
1131
X03281
15552 1091 Kbytes .Supplementary data files not provided
Less...
More...