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Status
Public on Dec 11, 2012
Title
[Mouse4302_Mm_ENTREZG] Affymetrix GeneChip Mouse Genome 430 2.0 Array [Brainarray Version 16]
Technology type
in situ oligonucleotide
Distribution
commercial
Organism
Mus musculus
Manufacturer
Affymetrix
Manufacture protocol
This is identical to GPL1261 but a custom CDF environment was used to extract data [Brainarray Version 16, Mouse4302_Mm_ENTREZG]. CDF and other files can be downloaded at: (see web link below).
Web link
http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/16.0.0/entrezg.asp
Submission date
Dec 11, 2012
Last update date
Dec 11, 2012
Contact name
Ryan Dale
E-mail(s)
dalerr@nih.gov
Organization name
National Institutes of Health
Department
National Institute of Child Health and Human Development
Lab
Bioinformatics and Scientific Programming Core
Street address
Rm 10D39, 10 Center Drive
City
Bethesda
State/province
MD
ZIP/Postal code
20892
Country
USA
Samples (70)
GSM1051215 , GSM1051216 , GSM1051217 , GSM1051218 , GSM1051219 , GSM1051220
GSM1051221 ,
GSM1051222 ,
GSM1051223 ,
GSM1051224 ,
GSM1562943 ,
GSM1562944 ,
GSM1562945 ,
GSM1562946 ,
GSM1562947 ,
GSM1562948 ,
GSM1562949 ,
GSM1562950 ,
GSM1562951 ,
GSM1562952 ,
GSM1562953 ,
GSM1562954 ,
GSM1562955 ,
GSM1562956 ,
GSM1562957 ,
GSM1562958 ,
GSM1562959 ,
GSM1562960 ,
GSM1562961 ,
GSM1562962 ,
GSM1562963 ,
GSM1562964 ,
GSM1562965 ,
GSM1562966 ,
GSM1562967 ,
GSM1562968 ,
GSM1820489 ,
GSM1820490 ,
GSM1820491 ,
GSM1820492 ,
GSM1820493 ,
GSM1820494 ,
GSM1820495 ,
GSM1820496 ,
GSM1820497 ,
GSM1820498 ,
GSM1820499 ,
GSM1820500 ,
GSM1820501 ,
GSM1820502 ,
GSM1820503 ,
GSM1820504 ,
GSM1820505 ,
GSM1820506 ,
GSM1820507 ,
GSM1820508 ,
GSM1868025 ,
GSM1868026 ,
GSM1868027 ,
GSM1868028 ,
GSM1868029 ,
GSM1868030 ,
GSM2188954 ,
GSM2188955 ,
GSM2188956 ,
GSM2188957 ,
GSM2188958 ,
GSM2188959 ,
GSM2188960 ,
GSM2188961
Series (5)
GSE42839
Expression changes in MEL cells upon differentiation and Ldb1 knockdown
GSE64019
Mouse Smarcb1-deficient models recapitulate subtypes of human rhabdoid tumors.
GSE70852
Dorsal root ganglia (DRG) and Sciatic nerve (SCN) in female BTBR ob/ob mice - diabetic peripheral neuropathy
GSE72678
Expression data from neuroblastoma of TH-MYCN/KI RetM919T mice
GSE82319
PRKCI promotes immune suppression in ovarian cancer through YAP1
Relations
Alternative to
GPL1261 (Alternative CDF [official])
Data table header descriptions
ID
ORF
Entrez Gene Identifier
description
SPOT_ID
Data table
ID
ORF
description
SPOT_ID
100008567_at
100008567
predicted gene 14964
100009600_at
100009600
zinc finger, GATA-like protein 1
100012_at
100012
oogenesin 3
100017_at
100017
low density lipoprotein receptor adaptor protein 1
100019_at
100019
midasin homolog (yeast)
100034251_at
100034251
predicted gene 11428
100034739_at
100034739
predicted gene, 17762
100034748_at
100034748
RIKEN cDNA A930017K11 gene
100036520_at
100036520
predicted gene 14318
100036521_at
100036521
predicted gene 16039
100036523_at
100036523
predicted gene, 16982
100036768_at
100036768
predicted gene 11696
100037258_at
100037258
DnaJ (Hsp40) homolog, subfamily C, member 3
100037262_at
100037262
predicted gene 12359
100037278_at
100037278
family with sequence similarity 129, member C
100038347_at
100038347
family with sequence similarity 174, member B
100038358_at
100038358
predicted gene 10857
100038371_at
100038371
zinc finger protein 389
100038392_at
100038392
predicted gene 10785
100038398_at
100038398
predicted gene 10567
Total number of rows: 17566 Table truncated, full table size 883 Kbytes .
Supplementary file
Size
Download
File type/resource
GPL16368_Mouse4302_Mm_ENTREZG.cdf.gz
6.9 Mb
(ftp) (http)
CDF
GPL16368_Mouse4302_Mm_ENTREZG.cdf.txt.gz
2.8 Mb
(ftp) (http)
TXT
GPL16368_Mouse4302_Mm_ENTREZG_desc.annot.txt.gz
85.2 Kb
(ftp) (http)
TXT
GPL16368_Mouse4302_Mm_ENTREZG_desc.txt.gz
211.2 Kb
(ftp) (http)
TXT
GPL16368_Mouse4302_Mm_ENTREZG_mapping.txt.gz
2.2 Mb
(ftp) (http)
TXT
GPL16368_Mouse4302_Mm_ENTREZG_probe_tab.txt.gz
3.6 Mb
(ftp) (http)
TXT