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Platform GPL13328 Query DataSets for GPL13328
Status Public on Mar 26, 2011
Title TaqMan(r) Array Human MicroRNA A Cards v2.0
Technology type RT-PCR
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Applied Biosystems
Manufacture protocol See manufacturer's website (http://www.appliedbiosystems.com/).
Catalog number 4398965
 
 
Submission date Mar 25, 2011
Last update date Mar 26, 2011
Contact name James F Reid
E-mail(s) james.reid@ifom-ieo-campus.it
Organization name Fondazione Istituto FIRC di Oncologia Molecolare
Department Molecular Genetics of Cancer
Lab Cancer genomics
Street address Via Adamello, 16
City Milano
ZIP/Postal code 20139
Country Italy
 
Samples (153) GSM701211, GSM701212, GSM701213, GSM701214, GSM701215, GSM701216 
Series (9)
GSE28364 MicroRNA profiling in colorectal cancer highlights miR-1 involvement in MET-dependent proliferation
GSE28659 High resolution microRNA signatures in human whole saliva
GSE29620 HL-60 treated with TPA

Data table header descriptions
ID
Well card well
Port card port (lane)
Detector detector name (assay name + part number)
Part Number assay part number
Task type of assay (target or Endogenous Control)
AB Assay ID assay id
SEQUENCE
Assay Name assay name
miRNA_ID
SPOT_ID

Data table
ID Well Port Detector Part Number Task AB Assay ID SEQUENCE Assay Name miRNA_ID SPOT_ID
1.hsa-let-7a-4373169 1 Port1 hsa-let-7a-4373169 4373169 Target 377 UGAGGUAGUAGGUUGUAUAGUU hsa-let-7a hsa-let-7a
2.hsa-let-7c-4373167 2 Port1 hsa-let-7c-4373167 4373167 Target 379 UGAGGUAGUAGGUUGUAUGGUU hsa-let-7c hsa-let-7c
3.hsa-let-7d-4395394 3 Port1 hsa-let-7d-4395394 4395394 Target 2283 AGAGGUAGUAGGUUGCAUAGUU hsa-let-7d hsa-let-7d
4.hsa-let-7e-4395517 4 Port1 hsa-let-7e-4395517 4395517 Target 2406 UGAGGUAGGAGGUUGUAUAGUU hsa-let-7e hsa-let-7e
5.hsa-let-7f-4373164 5 Port1 hsa-let-7f-4373164 4373164 Target 382 UGAGGUAGUAGAUUGUAUAGUU hsa-let-7f hsa-let-7f
6.hsa-let-7g-4395393 6 Port1 hsa-let-7g-4395393 4395393 Target 2282 UGAGGUAGUAGUUUGUACAGUU hsa-let-7g hsa-let-7g
7.hsa-miR-1-4395333 7 Port1 hsa-miR-1-4395333 4395333 Target 2222 UGGAAUGUAAAGAAGUAUGUAU hsa-miR-1 hsa-miR-1
8.hsa-miR-9-4373285 8 Port1 hsa-miR-9-4373285 4373285 Target 583 UCUUUGGUUAUCUAGCUGUAUGA hsa-miR-9 hsa-miR-9
9.hsa-miR-10a-4373153 9 Port1 hsa-miR-10a-4373153 4373153 Target 387 UACCCUGUAGAUCCGAAUUUGUG hsa-miR-10a hsa-miR-10a
10.hsa-miR-10b-4395329 10 Port1 hsa-miR-10b-4395329 4395329 Target 2218 UACCCUGUAGAACCGAAUUUGUG hsa-miR-10b hsa-miR-10b
11.MammU6-4395470 11 Port1 MammU6-4395470 4395470 Endogenous Control 1973 GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUUCGUGAAGCGUUCCAUAUUUUUACUGCCCUCCAUGCCCUGCCCCACAAACGCUCUGAUAACAGUCUGUCCCUGUCUCUCUCCUGCUGCUCCUAUGGAAGCGAAGUUUUCCGCUCCUGCAGAAAGCAAAGUUACGACUCAGAGACGGCUGAGGAUGACAUCAGCGAUGUGCAGGGAACCCAGCGCCUGGAGCUUCGGGAUGACGGGGCCUUCAGCACCCCCACGGGGGGUUCUGACACCCUGGUGGGCACCUCCCUGGACACACCCCCGACCUCCGUGACAGGCACCUCAGAGGAGCAAGUGAGCUGGUGGGGCAGCGGGCAGACGGUCCUGGAGCAGGAAGCGGGCAGUGGGGGUGGCACCCGCCGCCUCCCGGGCAGCCCAAGGCAAGCACAGGCAACCGGGGCCGGGCCACGGCACCUGGGGGUGGAGCCGCUGGUGCGGGCAUCUCGAGCUAAUCUGGUGGG U6 snRNA U6 snRNA
12.MammU6-4395470 12 Port1 MammU6-4395470 4395470 Endogenous Control 1973 GUGCUCGCUUCGGCAGCACAUAUACUAAAAUUGGAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAUUCGUGAAGCGUUCCAUAUUUUUACUGCCCUCCAUGCCCUGCCCCACAAACGCUCUGAUAACAGUCUGUCCCUGUCUCUCUCCUGCUGCUCCUAUGGAAGCGAAGUUUUCCGCUCCUGCAGAAAGCAAAGUUACGACUCAGAGACGGCUGAGGAUGACAUCAGCGAUGUGCAGGGAACCCAGCGCCUGGAGCUUCGGGAUGACGGGGCCUUCAGCACCCCCACGGGGGGUUCUGACACCCUGGUGGGCACCUCCCUGGACACACCCCCGACCUCCGUGACAGGCACCUCAGAGGAGCAAGUGAGCUGGUGGGGCAGCGGGCAGACGGUCCUGGAGCAGGAAGCGGGCAGUGGGGGUGGCACCCGCCGCCUCCCGGGCAGCCCAAGGCAAGCACAGGCAACCGGGGCCGGGCCACGGCACCUGGGGGUGGAGCCGCUGGUGCGGGCAUCUCGAGCUAAUCUGGUGGG U6 snRNA U6 snRNA
13.hsa-miR-15a-4373123 13 Port1 hsa-miR-15a-4373123 4373123 Target 389 UAGCAGCACAUAAUGGUUUGUG hsa-miR-15a hsa-miR-15a
14.hsa-miR-15b-4373122 14 Port1 hsa-miR-15b-4373122 4373122 Target 390 UAGCAGCACAUCAUGGUUUACA hsa-miR-15b hsa-miR-15b
15.hsa-miR-16-4373121 15 Port1 hsa-miR-16-4373121 4373121 Target 391 UAGCAGCACGUAAAUAUUGGCG hsa-miR-16 hsa-miR-16
16.hsa-miR-17-4395419 16 Port1 hsa-miR-17-4395419 4395419 Target 2308 CAAAGUGCUUACAGUGCAGGUAG hsa-miR-17 hsa-miR-17
17.hsa-miR-18a-4395533 17 Port1 hsa-miR-18a-4395533 4395533 Target 2422 UAAGGUGCAUCUAGUGCAGAUAG hsa-miR-18a hsa-miR-18a
18.hsa-miR-18b-4395328 18 Port1 hsa-miR-18b-4395328 4395328 Target 2217 UAAGGUGCAUCUAGUGCAGUUAG hsa-miR-18b hsa-miR-18b
19.hsa-miR-19a-4373099 19 Port1 hsa-miR-19a-4373099 4373099 Target 395 UGUGCAAAUCUAUGCAAAACUGA hsa-miR-19a hsa-miR-19a
20.hsa-miR-19b-4373098 20 Port1 hsa-miR-19b-4373098 4373098 Target 396 UGUGCAAAUCCAUGCAAAACUGA hsa-miR-19b hsa-miR-19b

Total number of rows: 384

Table truncated, full table size 49 Kbytes.




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