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GALK2 galactokinase 2 [ Equus caballus (horse) ]

Gene ID: 100070040, updated on 17-Aug-2024

Summary

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Official Symbol
GALK2provided by VGNC
Official Full Name
galactokinase 2provided by VGNC
Primary source
VGNC:VGNC:18220
See related
Ensembl:ENSECAG00000017631
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See GALK2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 1 NC_009144.3 (141671113..141790446, complement)

Chromosome 1 - NC_009144.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111767826 Neighboring gene family with sequence similarity 227 member B Neighboring gene fibroblast growth factor 7 Neighboring gene COP9 signalosome subunit 2 Neighboring gene uncharacterized LOC111767829

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009144.3 Chromosome 1 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables galactokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in galactose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylgalactosamine kinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009144.3 Reference EquCab3.0 Primary Assembly

    Range
    141671113..141790446 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023617713.1 → XP_023473481.1  N-acetylgalactosamine kinase isoform X4

    Conserved Domains (1) summary
    cl26519
    Location:11 → 373
    GalKase_gal_bdg; Galactokinase galactose-binding signature

  2. XM_001499722.5 → XP_001499772.4  N-acetylgalactosamine kinase isoform X2

    UniProtKB/TrEMBL
    F6R383
    Related
    ENSECAP00000015463.3, ENSECAT00000018926.3
    Conserved Domains (3) summary
    PLN02521
    Location:7 → 444
    PLN02521; galactokinase
    pfam08544
    Location:339 → 419
    GHMP_kinases_C; GHMP kinases C terminal
    pfam10509
    Location:13 → 62
    GalKase_gal_bdg; Galactokinase galactose-binding signature

  3. XM_023617705.1 → XP_023473473.1  N-acetylgalactosamine kinase isoform X3

    UniProtKB/TrEMBL
    A0A9L0SU60
    Conserved Domains (1) summary
    cl26519
    Location:11 → 424
    GalKase_gal_bdg; Galactokinase galactose-binding signature

  4. XM_023617694.1 → XP_023473462.1  N-acetylgalactosamine kinase isoform X1

    UniProtKB/TrEMBL
    A0A9L0SU60
    Related
    ENSECAP00000065461.1, ENSECAT00000133726.1
    Conserved Domains (1) summary
    cl26519
    Location:11 → 457
    GalKase_gal_bdg; Galactokinase galactose-binding signature

  5. XM_014733659.2 → XP_014589145.2  N-acetylgalactosamine kinase isoform X5

    UniProtKB/TrEMBL
    A0A9L0S2F7, A0A9L0SU60
    Related
    ENSECAP00000069036.1, ENSECAT00000086019.1
    Conserved Domains (1) summary
    cl26519
    Location:18 → 455
    GalKase_gal_bdg; Galactokinase galactose-binding signature

RNA

  1. XR_002799651.1 RNA Sequence

Nucleotide Protein
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