Similar studies for GEO DataSets (Select 200154865) - GEO DataSets

Select item 2001548651.

Identification of three enzymes of the vanillin and vanillic acid metabolic pathway in the filamentous fungi Aspergillus niger

(Submitter supplied) The aim of this study was to find candidate genes in A. niger involved in the vanillic acid metabolic pathway.

Organism:: Aspergillus niger

Type:: Expression profiling by high throughput sequencing

Platform:: GPL25519
8 Samples

Download data: TXT

Series

Accession:: GSE154865

ID:: 200154865

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001350012.

Evolutionary adaptation of Aspergillus niger for increased ferulic acid tolerance

(Submitter supplied) The aim of this study was to find candidate genes in A. niger involved in the increase tolerance against ferulic acid in A. niger Fa6

Organism:: Aspergillus niger

Type:: Expression profiling by high throughput sequencing

Platform:: GPL21721
8 Samples

Download data: TXT

Series

Accession:: GSE135001

ID:: 200135001

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001349993.

Discovery and characterization of a novel p-hydroxybenzoate-m-hydroxylase, protocatechuate 3,4 ring-cleavage dioxygenase and hydroxyquinol 1,2 ring-cleavage dioxygenase from Aspergillus niger

(Submitter supplied) The aim of this study was to find candidate genes in A. niger involved in the degradation of benzoic acid.

Organism:: Aspergillus niger

Type:: Expression profiling by high throughput sequencing

Platform:: GPL21721
10 Samples

Download data: TXT

Series

Accession:: GSE134999

ID:: 200134999

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001193114.

Comparative transcriptomics of Aspergillus niger when deleted or overexpressed for the putative transcription factors MjkA, MjkB and the histon deactelyase HdaX

(Submitter supplied) Purpose: Expression profiling of two ORFs encoding putative transcription factors: An07g07370 (TF1/MjkA) and An12g07690 (TF2/MjkB), and a histone deacetylase (An09g06520, HdaX) under carbon-limited batch cultivations (biological duplicate runs) in Aspergillus niger. Methods: Single deletion strains for TF1, TF2 and HD, respectively, (ii) a double deletion strain for TF1 and TF2, and (iii) individual conditional overexpression mutants for TF1, TF2 and HD using the Tet-on system were analysed. more...

Organism:: Aspergillus niger

Type:: Expression profiling by high throughput sequencing

Platform:: GPL25519
28 Samples

Download data: TXT

Series

Accession:: GSE119311

ID:: 200119311

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Select item 2000998655.

In vivo functional analysis of L-rhamnose metabolic pathway in Aspergillus niger: a tool to identify the potential inducer of RhaR

(Submitter supplied) The genes of the non-phosphorylative L-rhamnose catabolic pathway have been identified for several yeast species. In Pichia stipitis, all L-rhamnose pathway genes are organized in a cluster, which is conserved in Aspergillus niger, except for the lra-4 ortholog (lraD). The A. niger cluster also contains the gene encoding the L-rhamnose responsive transcription factor (RhaR) that has been shown to control the expression of genes involved in L-rhamnose release and catabolism. more...

Organism:: Aspergillus niger

Type:: Expression profiling by high throughput sequencing

Platform:: GPL21721
10 Samples

Download data: TXT

Series

Accession:: GSE99865

ID:: 200099865

PubMed Full text in PMC Similar studies SRA Run Selector

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