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Series GSE135001 Query DataSets for GSE135001
Status Public on Feb 26, 2020
Title Evolutionary adaptation of Aspergillus niger for increased ferulic acid tolerance
Organism Aspergillus niger
Experiment type Expression profiling by high throughput sequencing
Summary The aim of this study was to find candidate genes in A. niger involved in the increase tolerance against ferulic acid in A. niger Fa6
 
Overall design Transcriptome data on aromatic compounds was used to find candidate genes encoding ferulic acid metabolic enzymes
 
Contributor(s) Lubbers RJ, Dilokpimol A, Peng M, Visser J, Hildén KS, de Vries RP
Citation(s) 31674709, 33950281, 34344380
Submission date Jul 29, 2019
Last update date Aug 11, 2021
Contact name Ronald de Vries
E-mail(s) fungalphysiology@gmail.com
Phone + 31 (0)30 2122600
Organization name Centre of fungal biodiversity
Department fungal physiology
Street address Uppsalalaan 8
City Utrecht
ZIP/Postal code 3584 CT
Country Netherlands
 
Platforms (1)
GPL21721 Illumina HiSeq 2000 (Aspergillus niger)
Samples (8)
GSM3983442 Mycelium, F-PC-1
GSM3983443 Mycelium, F-PC-2
GSM3983444 Mycelium, F-FA-1
Relations
BioProject PRJNA557115
SRA SRP216647

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE135001_RAW.tar 1.3 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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