Similar studies for GEO DataSets (Select 200005425) - GEO DataSets

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Items: 20

Select item 2000054251.

Spinal cord and dorsal root ganglion gene expression

(Submitter supplied) We used microarrays to test the fundamental quantitative differences between central and peripheral nervous system transcriptomes. Keywords: repeat

Organism:: Mus musculus

Type:: Expression profiling by array

Dataset:: GDS2209
Platform:: GPL1261
6 Samples

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Series

Accession:: GSE5425

ID:: 200005425

Select item 22092.

Spinal cord and dorsal root ganglion

Analysis of spinal cord (SC) and dorsal root ganglion (DRG). The central nervous system (CNS) comprises the brain and SC; the peripheral nervous system (PNS) includes spinal and cranial nerves along with their associated DRGs. Results identify gene expression differences between the CNS and the PNS.

Organism:: Mus musculus

Type:: Expression profiling by array, transformed count, 2 tissue sets

Platform:: GPL1261
Series:: GSE5425
6 Samples

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DataSet

Accession:: GDS2209

ID:: 2209

Select item 2000029173.

Profiling of visceral sensory neurons in dorsal root and nodose ganglia in BALB/c mice.

(Submitter supplied) Vagal afferent neurons are thought to convey primarily physiological information, whereas spinal afferents transmit noxious signals from the viscera to the central nervous system. In order to elucidate molecular identities for these different properties, we compared gene expression profiles of neurons located in nodose ganglia (NG) and dorsal root ganglia (DRG) in mice. Intraperitoneal administration of Alexa Fluor-488 conjugated Cholera toxin B allowed identification of neurons projecting to the viscera. more...

Organism:: Mus musculus

Type:: Expression profiling by array

Datasets:: GDS1634 GDS1635
Platforms:: GPL1261 GPL81
42 Samples

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Series

Accession:: GSE2917

ID:: 200002917

Select item 16354.

Nodose and dorsal root ganglia comparison (MG-430 2.0)

Analysis of laser-captured neurons of the nodose (NG) and dorsal root ganglia (DRG). Vagal afferents arise from NG and convey mostly physiological information, while spinal afferents arise from DRG and transmit noxious signals. Results elucidate molecular identities for these different properties.

Organism:: Mus musculus

Type:: Expression profiling by array, count, 2 tissue sets

Platform:: GPL1261
Series:: GSE2917
20 Samples

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DataSet

Accession:: GDS1635

ID:: 1635

Select item 16345.

Nodose and dorsal root ganglia comparison (MG-U74A)

Comparison of whole nodose ganglia (NG) and dorsal root ganglia (DRG) vs. the population of laser-captured visceral sensory neurons. Results identify striking differences and the need for microdissection when studying visceral sensory neurons because of dilution of signal by somatic sensory neurons.

Organism:: Mus musculus

Type:: Expression profiling by array, count, 2 protocol, 2 tissue sets

Platform:: GPL81
Series:: GSE2917
22 Samples

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DataSet

Accession:: GDS1634

ID:: 1634

Select item 2000021786.

Mouse Expression DB 2001 CHMC

(Submitter supplied) Expression profiles of different mouse tissue samples profiles. Keywords: other

Organism:: Mus musculus

Type:: Expression profiling by array

Platform:: GPL1406
161 Samples

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Series

Accession:: GSE2178

ID:: 200002178

Select item 2000061067.

Sense-antisense transcript comparison in mouse brain and kidney

(Submitter supplied) Comparison of sense (forward probes) and antisense (reverse probes on U74 v1 gene arrays) transcripts in mouse kidney and brain. Positive calls related to antisense transcripts were compared to the cognate signals on the 430 version of mouse genome arrays to obtain genes that co expressed sense and antisense transcripts. This had to be done manually because divergent probe IDs on the two chip generations. more...

Organism:: Mus musculus

Type:: Expression profiling by array

5 related Platforms
7 Samples

Download data: CEL

Series

Accession:: GSE6106

ID:: 200006106

Select item 2000119798.

Characterization of boundary cap cells using novel markers obtained by RNA profiling

(Submitter supplied) Neural crest (NC) cells are a multipotent, highly migratory cell population that generates most of the components of the peripheral nervous system (PNS), including the glial satellite and Schwann cells. In addition, NC cells also gives rise to another type of PNS glial cell, the boundary cap (BC) cells. These latter cells are located at the interface between central nervous system and PNS, at the exit/entry points of ventral motor and dorsal sensory axons. more...

Organism:: Mus musculus

Type:: Expression profiling by array

Platform:: GPL7017
8 Samples

Download data: GPR

Series

Accession:: GSE11979

ID:: 200011979

Select item 2000036289.

Rat Normal Cochlear Nucleus

(Submitter supplied) The cochlear nucleus is the first central pathway involved in the processing of peripheral auditory activity. It is heterogeneous in neuronal populations and physiologic responses and is organized in three major subdivisions: the anterior ventral cochlear nucleus (AVCN), the posterior ventral cochlear nucleus (PVCN) and the dorsal cochlear nucleus (DCN). Although each region demonstrates multiple cell types and functions, there are predominant populations of neurons in each region that underlie the principal role each subdivision plays in auditory processing. more...

Organism:: Rattus norvegicus

Type:: Expression profiling by SAGE

Platform:: GPL23
3 Samples

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Series

Accession:: GSE3628

ID:: 200003628

PubMed Full text in PMC Similar studies

Select item 20000262910.

Dysferlin deficiency modulates the proximal-distal muscle transcriptome

(Submitter supplied) By comparing the transcriptome from proximal (quadriceps femoris, QF) and distal (tibialis anterior, TA)muscle groups in dysferlin deficient mouse muscle (the SJL mutation bred onto C57BL/10 to produces C57BL/10-SJL.Dysf) with proximal and distal muscle groups from control C57BL/10 mice of an equivalent age (3-weeks old, prior to the onset of overt pathology) we aim to address the issues of muscle selectivity in this this form of muscular dystrophy. more...

Organism:: Mus musculus

Type:: Expression profiling by array

Dataset:: GDS1233
Platform:: GPL81
12 Samples

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Series

Accession:: GSE2629

ID:: 200002629

Select item 123311.

Dysferlin deficiency effect on proximal and distal muscles

Comparison of the proximal quadriceps femoris muscle to the distal tibialis anterior muscle of 3 week old dysferlin deficient mutants. Dysferlin mutations can result in the neuromuscular disorders Limb-Girdle muscular dystrophy type 2B and Myoshi myopathy.

Organism:: Mus musculus

Type:: Expression profiling by array, count, 2 genotype/variation, 2 tissue sets

Platform:: GPL81
Series:: GSE2629
12 Samples

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DataSet

Accession:: GDS1233

ID:: 1233

Select item 20000256012.

Transcriptomes analysis of mouse developing forelimb and hindlimb autopods

(Submitter supplied) Transcriptomes of mouse embryonic autopods were generated detecting expression of approximately 26179 transcripts in the developing forelimb or hindlimb autopods, representing about 58 % of the probe sets on MOE-430 A/B GeneChip. Three biological replicate array experiments were finished for each condition and MAS5.0 signal were used to do data analysis. Forty-four transcripts with expression differences higher than 2-fold were detected(T test, P<0.05), including Tbx4, Tbx5, Hoxc10 and Pitx1 which were previously shown to be differentially expressed in developing forelimb and hindlimb bud by in situ hybridization and SAGE study (Margulies 2001). more...

Organism:: Mus musculus

Type:: Expression profiling by array

Datasets:: GDS1342 GDS1343
Platforms:: GPL339 GPL340
12 Samples

Download data: CEL

Series

Accession:: GSE2560

ID:: 200002560

Select item 134313.

Forelimb and hindlimb embryonic autopod comparison (MG-430B)

Analysis of forelimb and hindlimb autopod tissues at embryonic day 12.5. Results provide insight into the molecular mechanisms regulating the formation of forelimbs and hindlimbs.

Organism:: Mus musculus

Type:: Expression profiling by array, count, 2 tissue sets

Platform:: GPL340
Series:: GSE2560
6 Samples

Download data: CEL

DataSet

Accession:: GDS1343

ID:: 1343

Select item 134214.

Forelimb and hindlimb embryonic autopod comparison (MG-430A)

Analysis of forelimb and hindlimb autopod tissues at embryonic day 12.5. Results provide insight into the molecular mechanisms regulating the formation of forelimbs and hindlimbs.

Organism:: Mus musculus

Type:: Expression profiling by array, count, 2 tissue sets

Platform:: GPL339
Series:: GSE2560
6 Samples

Download data: CEL

DataSet

Accession:: GDS1342

ID:: 1342

Select item 20009676515.

Whole transcriptome expression of trigeminal ganglia compared to dorsal root ganglia in Rattus norvegicus

(Submitter supplied) RNA-Sequencing of the trigeminal ganglia and dorsal root ganglia in male naive rats (Wistar Han) of 10 weeks old.

Organism:: Rattus norvegicus

Type:: Expression profiling by high throughput sequencing

Platform:: GPL18694
12 Samples

Download data: TXT

Series

Accession:: GSE96765

ID:: 200096765

PubMed Similar studies SRA Run Selector

Select item 20000531316.

Comparative analysis of gene expression in A/J CB versus DBA/2J

(Submitter supplied) We hypothesize that gene expression in the CBs of these two strains of mice are divergent thus contributing to the disparity in the phenotypes. More specifically, (1) genes related to CB function are expressed less in the A/J mice compared to DBA/2J mice; (2) gene expression levels of morphogenic and trophic factors of the CB maybe significantly lower in the A/J mice than the DBA/2J mice. In order to test these hypotheses, we utilized microarray analysis to examine transcriptional differences between CBs of both strains of mice. more...

Organism:: Mus musculus

Type:: Expression profiling by array

Dataset:: GDS2466
Platform:: GPL1261
6 Samples

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Series

Accession:: GSE5313

ID:: 200005313

Select item 246617.

Carotid body and genetic background

Comparison of carotid bodies (CBs) of A/J and DBA/2J animals. The CB is the primary hypoxic chemosensory organ. A/J animals are low responders to hypoxia, while DBA/2J animals are high responders. Results provide insight into the mechanisms regulating hypoxic sensitivity in the CB.

Organism:: Mus musculus

Type:: Expression profiling by array, count, 2 strain sets

Platform:: GPL1261
Series:: GSE5313
6 Samples

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DataSet

Accession:: GDS2466

ID:: 2466

Select item 20000623618.

The human reticulocyte transcriptome

(Submitter supplied) RNA from circulating blood reticulocytes was utilized to provide a robust description of genes transcribed at the final stages of erythroblast maturation. After depletion of leukocytes and platelets, Affymetrix HG-U133 arrays were hybridized with probe from total RNA isolated from blood sampled from 14 umbilical cords and 14 healthy adult humans. Keywords: Adult vs. fetal reticulocyte transcriptome comparison

Organism:: Homo sapiens

Type:: Expression profiling by array

Datasets:: GDS2655 GDS2656
Platforms:: GPL96 GPL97
56 Samples

Download data: CEL, EXP

Series

Accession:: GSE6236

ID:: 200006236

Select item 265619.

Fetal and adult reticulocytes (HG-U133B)

Analysis of circulating blood reticulocytes from umbilical cords and normal adults. Reticulocytes are immature red blood cells containing residual RNA. Results provide insight into the molecular basis of terminal erythroid differentiation.