Sasa hainanensis - GEO DataSets

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Select item 2001137591.

Anti-fatigure properties of Sasa quelpaertensis leaf extracts in mice

(Submitter supplied) The study aimed the effects of Sasa quelpaertensis leaf hot water extract (SQH) on anti-fatigue function and the global gene expression pattern in muscle tissue. When rat skeletal muscle cells were cultured in hypoxic condition, the levels of lactate and lactate dehydrogenase (LDH) was increased approximately more than 2-fold, but SQH decreased effectively these levels. Thus, we assessed the exercise and fatigue recovery function using several physical biomarkers such as glycogen, lactate and so on in high intensity exercise mice. more...

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing

Platform:: GPL19057
3 Samples

Download data: TXT

Series

Accession:: GSE113759

ID:: 200113759

SRA Run Selector

Select item 2001438852.

Gene expression profiling in periodontal ligament cells derived from Down syndrome

(Submitter supplied) We performed the microarray analysis for gene expression profiling in periodontal ligament cells derived from Down syndrome.

Organism:: Homo sapiens

Type:: Expression profiling by array

Platform:: GPL23159
2 Samples

Download data: CEL, CHP

Series

Accession:: GSE143885

ID:: 200143885

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2001210633.

The effects of Zoledronate on human peripheral blood mononuclear cells

(Submitter supplied) Zoledronate is well known to act on osteoclasts to inhibit bone resorption.Zoledronate is administrated intravenously in clinical use, however, actions of zoledronate on cells in blood circulation are not fully understood. To understand its actions of human peripheral blood mononuclear cells (h-PBMC), we performed gene expression profiling in zoledronate-treated h-PBMC.

Organism:: Homo sapiens

Type:: Expression profiling by array

Platform:: GPL23159
2 Samples

Download data: CEL, CHP

Series

Accession:: GSE121063

ID:: 200121063

Analyze with GEO2R

Select item 2001167954.

The role of the Synechocystis sp. PCC 6803 homolog of the circadian clock output regulator RpaA in day-night transitions

(Submitter supplied) Like many other organisms, cyanobacteria exhibit rhythmic gene expression with a period length of 24 hours to adapt to daily environmental changes. In the model organism Synechococcus elongatus PCC 7942 the central oscillator consists of three proteins: KaiA, KaiB and KaiC and utilizes the histidine kinase SasA and its response regulator RpaA as output-signaling pathway. Synechocystis sp. PCC 6803 contains two additional homologs of the kaiB and kaiC genes. more...

Organism:: Synechocystis sp. PCC 6803

Type:: Expression profiling by array

Platform:: GPL23938
8 Samples

Download data: TXT

Series

Accession:: GSE116795

ID:: 200116795

Analyze with GEO2R

Select item 2001003665.

Identification of candidate genes for generalized tonic–clonic seizures in Noda Epileptic Rat

(Submitter supplied) The Noda epileptic rat (NER) exhibits generalized tonic–clonic seizures (GTCS). A genetic linkage analysis demonstrated two GTCS-associated loci, Ner1 on Chr 1 and Ner3 on Chr 5. In single-locus congenic lines, neither wild-type Ner1 nor Ner3 allele suppressed GTCS, but both wild-type alleles suppressed GTCS when they were combined in double-locus congenic lines. Global expression analysis showed that Cckbr and St5 locating within Ner1 and Phf24 locating within Ner3 were significantly　downregulated. more...

Organism:: Rattus norvegicus

Type:: Expression profiling by array

Platform:: GPL14797
16 Samples

Download data: TXT

Series

Accession:: GSE100366

ID:: 200100366

Select item 2000873786.

Development of chemically modified peptide targeting BIG3-PHB2 interaction on estrogen-dependent breast cancer

(Submitter supplied) Our previous studies demonstrated that specific inhibition of the BIG3-PHB2 complex, which is indispensable for estrogen (E2)-signaling activation, using ERAP, a dominant-negative peptide inhibitor, leads to the suppression of E2-dependent breast cancer cell growth in vitro and in vivo. However, duration of its effect is very short for clinical use. Here, we developed the chemically modified ERAP using stapling methods (stERAP; stapled ERAP) to improve duration of their antitumor effects. more...

Organism:: Homo sapiens

Type:: Expression profiling by array

Platform:: GPL17077
4 Samples

Download data: TXT

Series

Accession:: GSE87378

ID:: 200087378

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000389597.

Gene expression profiling of triple negative breast cancer, normal ductal cells, and normal tissues

(Submitter supplied) To identify novel molecular targets for triple negative breast cancer (TNBC), we have employed whole genome microarray expression profiling. We purified 30 surgically resected breast cancer tissue diagnosed triple negative by means of immunohistochemical staining and 13 normal mammary ductal cells with lasermicrobeam microdissection system (PALM MicroBeam, Carl Zeiss MicroImaging Co., Ltd), performed whole human genome microarray, and compared gene expression levels of TNBC, normal mammary ductal cells, and normal vital organs to develop molecular targets with a minimum risk.

Organism:: Homo sapiens

Type:: Expression profiling by array

Platform:: GPL4133
47 Samples

Download data: TXT

Series

Accession:: GSE38959

ID:: 200038959

Select item 2000284308.

Circadian expression data of Synechococcus in WT, rpoD6-null, sasA-null and rpaA-null strains

(Submitter supplied) In the unicellular cyanobacterium, Synechococcus elongatus PCC 7942, most genes show rhythmic expression controlled by the Kai-based clock under continuous light conditions (LL). We found that rpoD6-null mutants impaired expression of clock-controlled genes peaking at hours 8-10 in LL, while sasA-null or rpaA-null mutants each arrested the expression profiles at subjective dawn.

Organism:: Synechococcus elongatus PCC 7942 = FACHB-805; Synechococcus elongatus PCC 6301

Type:: Expression profiling by array

Platform:: GPL8012
21 Samples

Download data: CEL, TXT

Series

Accession:: GSE28430

ID:: 200028430

Analyze with GEO2R

Select item 2000069249.

Salmonid host response to Hematopoietic Necrosis virus: cellular receptors, viral control and novel pathways of defence

(Submitter supplied) The transcriptional response of Atlantic salmon (Salmo salar) to infectious hematopoietic necrosis (IHN) virus was elucidated using 16,008 gene GRASP cDNA microarrays. S. salar were exposed to the IHN virus in a waterborne challenge, and kidney samples from five fish sampled on each of days 0, 1, 5 and 9 were analysed in the microarray study. Validation of nine of the significant genes was conducted on fish sampled on alternate days from 1 to 13 and compared to the unchallenged control sampled on day 0. more...

Organism:: Oncorhynchus mykiss; Salmo salar

Type:: Expression profiling by array

Platforms:: GPL2899 GPL3976
20 Samples

Download data: TIFF

Series

Accession:: GSE6924

ID:: 200006924

Analyze with GEO2R

Select item 30070257110.

sasA-null at LL 24 h (2011 March)

Organism:: Synechococcus elongatus PCC 7942 = FACHB-805

Source name:: sasA-null mutant cells collected at hour 24 under continuous light (LL)

Platform:: GPL8012
Series:: GSE28430

Download data: CEL

Sample

Accession:: GSM702571

ID:: 300702571

Select item 30070257011.

sasA-null at LL 12 h (2011 March)

Organism:: Synechococcus elongatus PCC 7942 = FACHB-805

Source name:: sasA-null mutant cells collected at hour 12 under continuous light (LL)

Platform:: GPL8012
Series:: GSE28430

Download data: CEL

Sample

Accession:: GSM702570

ID:: 300702570

Select item 30070256912.

sasA-null at LL 8 h (2011 March)

Organism:: Synechococcus elongatus PCC 7942 = FACHB-805

Source name:: sasA-null mutant cells collected at hour 8 under continuous light (LL)

Platform:: GPL8012
Series:: GSE28430

Download data: CEL

Sample

Accession:: GSM702569

ID:: 300702569

Select item 30070256813.

sasA-null at LL 4 h (2011 March)

Organism:: Synechococcus elongatus PCC 7942 = FACHB-805

Source name:: sasA-null mutant cells collected at hour 4 under continuous light (LL)

Platform:: GPL8012
Series:: GSE28430

Download data: CEL

Sample

Accession:: GSM702568

ID:: 300702568

Select item 30015946214.

Sasa kidney sample on day9 after waterborne challenged by IHN, replicate 5

Organism:: Salmo salar

Source name:: kidney tissue from a fish sampled on day9 after challenged by waterborne exposure to Infectious hematopoietic necrosis (IHN) virus, strain 93-057, replicate 5 (channel 1) pooled reference sample from all individuals collected (channel 2)

Platform:: GPL2899
Series:: GSE6924

Download data: TIFF

Sample

Accession:: GSM159462

ID:: 300159462

Select item 30015946015.

Sasa kidney sample on day9 after waterborne challenged by IHN, replicate 3

Organism:: Salmo salar

Source name:: kidney tissue from a fish sampled on day9 after challenged by waterborne exposure to Infectious hematopoietic necrosis (IHN) virus, strain 93-057, replicate 3 (channel 1) pooled reference sample from all individuals collected (channel 2)

Platform:: GPL2899
Series:: GSE6924

Download data: TIFF

Sample

Accession:: GSM159460

ID:: 300159460

Select item 30015945816.

Sasa kidney sample on day9 after waterborne challenged by IHN, replicate 1

Organism:: Salmo salar

Source name:: kidney tissue from a fish sampled on day9 after challenged by waterborne exposure to Infectious hematopoietic necrosis (IHN) virus, strain 93-057, replicate 1 (channel 1) pooled reference sample from all individuals collected (channel 2)

Platform:: GPL2899
Series:: GSE6924

Download data: TIFF

Sample

Accession:: GSM159458

ID:: 300159458

Select item 30015945717.

Sasa kidney sample on day5 after waterborne challenged by IHN, replicate 5

Organism:: Salmo salar

Source name:: kidney tissue from a fish sampled on day5 after challenged by waterborne exposure to Infectious hematopoietic necrosis (IHN) virus, strain 93-057, replicate 5 (channel 1) pooled reference sample from all individuals collected (channel 2)

Platform:: GPL2899
Series:: GSE6924

Download data: TIFF

Sample

Accession:: GSM159457

ID:: 300159457

Select item 30015945518.

Sasa kidney sample on day5 after waterborne challenged by IHN, replicate 3

Organism:: Salmo salar

Source name:: kidney tissue from a fish sampled on day5 after challenged by waterborne exposure to Infectious hematopoietic necrosis (IHN) virus, strain 93-057, replicate 3 (channel 1) pooled reference sample from all individuals collected (channel 2)

Platform:: GPL2899
Series:: GSE6924

Download data: TIFF

Sample

Accession:: GSM159455

ID:: 300159455

Select item 30015945319.

Sasa kidney sample on day5 after waterborne challenged by IHN, replicate 1

Organism:: Salmo salar

Source name:: kidney tissue from a fish sampled on day5 after challenged by waterborne exposure to Infectious hematopoietic necrosis (IHN) virus, strain 93-057, replicate 1 (channel 1) pooled reference sample from all individuals collected (channel 2)

Platform:: GPL2899
Series:: GSE6924

Download data: TIFF

Sample

Accession:: GSM159453

ID:: 300159453

Select item 30015945220.

Sasa kidney sample on day1 after waterborne challenged by IHN, replicate 5

Organism:: Salmo salar

Source name:: kidney tissue from a fish sampled on day1 after challenged by waterborne exposure to Infectious hematopoietic necrosis (IHN) virus, strain 93-057, replicate 5 (channel 1) pooled reference sample from all individuals collected (channel 2)