GEO DataSets

(Submitter supplied) Bacterial transcriptomes are dynamic, context-specific and condition-dependent. Infection by the soil bacterium, Burkholderia pseudomallei, causes melioidosis, an often fatal infectious disease of humans and animals. Possessing a large multi-chromosomal genome, B. pseudomallei is able to persist and survive in a multitude of environments. To obtain a comprehensive overview of B. pseudomallei expressed transcripts, we initiated whole-genome transcriptome profiling covering a broad spectrum of conditions and exposures – a so-called “condition compendium”. more...

Organism:

Burkholderia pseudomallei K96243; Burkholderia pseudomallei; Burkholderia pseudomallei Bp22

Type:

Expression profiling by genome tiling array

Platform:

GPL16432

332 Samples

Download data: PAIR

(Submitter supplied) NimbleGen design name 071211_BPK96243_CO_Tiling. A 385K tiling expression array fabricated by Roche NimbleGen (Roche NimbleGen, USA) based on the BpK96243 reference genome PRJNA57733_AssemblyASM1154v1 (Holden et al. 2004). The array contains 384,926 50-mer oligonucleotide probes representing both sense and antisense strands, with an overlapping mean distance of 15 bp between adjacent probes. Collectively, 95.1% of the BpK96243 non-repetivitive genome, including genic and intergenic regions, are represented on the array. more...

Organism:

Burkholderia pseudomallei K96243

3 Series

382 Samples

Download data: NDF, POS