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Items: 7

1.

Promoter proximal pausing in response to stress in serum deprived mouse fibroblasts.

(Submitter supplied) We have employed short-capped RNA sequencing (sc-RNA-seq) in order to identify genes whose expression is regulated by promoter proximal pausing of RNA Polymerase II (RNAPI) in response to stress stimulation. We used serum-deprived mouse Swiss 3T3 fibroblasts, either untreated (control) or treated with anisomycin to induce the p38/MAP kinase pathway.
Organism:
Mus musculus
Type:
Non-coding RNA profiling by high throughput sequencing
Platforms:
GPL11002 GPL13112
4 Samples
Download data: BW
Series
Accession:
GSE55775
ID:
200055775

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Mus musculus)

Organism:
Mus musculus
8229 Series
187279 Samples
Download data
Platform
Accession:
GPL13112
ID:
100013112

3.

Illumina Genome Analyzer IIx (Mus musculus)

Organism:
Mus musculus
895 Series
7710 Samples
Download data
Platform
Accession:
GPL11002
ID:
100011002

4.

scRNA_1hA_replicate1

Organism:
Mus musculus
Source name:
Serum-starved (72h) Swiss 3T3 fibroblasts, 1h anisomycin treated (188.5 nM), replicate 1
Platform:
GPL11002
Series:
GSE55775 GSE55784
Download data: BW
Sample
Accession:
GSM1345951
ID:
301345951

SRA Run Selector

5.

scRNA_control_untreated_replicate1

Organism:
Mus musculus
Source name:
Serum-starved (72h) Swiss 3T3 fibroblasts, replicate 1
Platform:
GPL11002
Series:
GSE55775 GSE55784
Download data: BW
Sample
Accession:
GSM1345949
ID:
301345949

SRA Run Selector

6.

scRNA_1hA_replicate2

Organism:
Mus musculus
Source name:
Serum-starved (72h) Swiss 3T3 fibroblasts, 1h anisomycin treated (188.5 nM), replicate 2
Platform:
GPL13112
Series:
GSE55775 GSE55784
Download data: BW
Sample
Accession:
GSM1345952
ID:
301345952

SRA Run Selector

7.

scRNA_control_untreated_replicate2

Organism:
Mus musculus
Source name:
Serum-starved (72h) Swiss 3T3 fibroblasts, replicate 2
Platform:
GPL13112
Series:
GSE55775 GSE55784
Download data: BW
Sample
Accession:
GSM1345950
ID:
301345950

SRA Run Selector

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