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Series GSE55784 Query DataSets for GSE55784
Status Public on Aug 11, 2014
Title Genome-wide analysis of stress response in mouse fibroblasts
Organism Mus musculus
Experiment type Expression profiling by array
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 25135956
Submission date Mar 11, 2014
Last update date May 15, 2019
Contact name Anna Sawicka
E-mail(s) anna.sawicka@mpibpc.mpg.de
Organization name Max Planck Institure for Biophysical Chemistry
Department Dep. of Molecular Biology
Lab Cramer
Street address Am Fassberg 11
City Goettingen
ZIP/Postal code 37077
Country Germany
 
Platforms (3)
GPL4134 Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Feature Number version)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (56)
GSM1339108 3T3_control_untreated_replicate1
GSM1339109 3T3_control_untreated_replicate2
GSM1339110 3T3_control_untreated_replicate3
This SuperSeries is composed of the following SubSeries:
GSE55554 Transcriptional response to stress in serum deprived mouse fibroblasts
GSE55774 Stress-induced signaling to the nucleosome in serum deprived mouse fibroblasts.
GSE55775 Promoter proximal pausing in response to stress in serum deprived mouse fibroblasts.
Relations
BioProject PRJNA240990

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE55784_RAW.tar 3.1 Gb (http)(custom) TAR (of BW, TXT)
SRA Run SelectorHelp
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