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dbVar

Database of genomic structural variation

nsv6630455

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:48,390

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 809 SVs from 76 studies. See in: genome view

Remapped(Score: Perfect):97,711,949-97,760,338

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6630455	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000005.10	Chr5	97,711,949	97,760,338
nsv6630455	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000005.9	Chr5	97,047,653	97,096,042

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18283789	deletion	OSC2273	SNP array	Probe signal intensity	nssv18282870, nssv18283787, nssv18283788
nssv18286880	deletion	OSC2988	SNP array	Probe signal intensity	nssv18286676, nssv18286878, nssv18287568
nssv18308989	deletion	OSC7078	SNP array	Probe signal intensity	11

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18283789	Remapped	Perfect	NC_000005.10:g.(?_ 97711949)_(9776033 8_?)del	GRCh38.p12	First Pass	NC_000005.10	Chr5	97,711,949	97,760,338
nssv18286880	Remapped	Perfect	NC_000005.10:g.(?_ 97711949)_(9776033 8_?)del	GRCh38.p12	First Pass	NC_000005.10	Chr5	97,711,949	97,760,338
nssv18308989	Remapped	Perfect	NC_000005.10:g.(?_ 97711949)_(9776033 8_?)del	GRCh38.p12	First Pass	NC_000005.10	Chr5	97,711,949	97,760,338
nssv18283789	Submitted genomic		NC_000005.9:g.(?_9 7047653)_(97096042 _?)del	GRCh37 (hg19)		NC_000005.9	Chr5	97,047,653	97,096,042
nssv18286880	Submitted genomic		NC_000005.9:g.(?_9 7047653)_(97096042 _?)del	GRCh37 (hg19)		NC_000005.9	Chr5	97,047,653	97,096,042
nssv18308989	Submitted genomic		NC_000005.9:g.(?_9 7047653)_(97096042 _?)del	GRCh37 (hg19)		NC_000005.9	Chr5	97,047,653	97,096,042

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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