nsv6623113

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:13
Validation:Not tested
Clinical Assertions: No
Region Size:66,761

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 670 SVs from 78 studies. See in: genome view

Remapped(Score: Perfect):43,632,222-43,698,982

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6623113	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	43,632,222	43,698,982
nsv6623113	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	43,924,420	43,991,180

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18283237	deletion	OSC0239	SNP array	Probe signal intensity	nssv18283581, nssv18282947, nssv18282941
nssv18283407	deletion	OSC2465	SNP array	Probe signal intensity	10
nssv18283787	deletion	OSC2273	SNP array	Probe signal intensity	nssv18283789, nssv18283788, nssv18282870
nssv18284063	deletion	OSC2452	SNP array	Probe signal intensity	6
nssv18287231	deletion	OSC2987	SNP array	Probe signal intensity	8
nssv18292844	deletion	OSC4078	SNP array	Probe signal intensity	6
nssv18293470	deletion	OSC4105	SNP array	Probe signal intensity	nssv18293795, nssv18293794
nssv18295242	deletion	OSC4475	SNP array	Probe signal intensity	nssv18295793, nssv18295792, nssv18295483
nssv18296637	deletion	OSC4821	SNP array	Probe signal intensity	nssv18296869, nssv18296870, nssv18297204
nssv18305810	deletion	OSC0665	SNP array	Probe signal intensity	6
nssv18317283	deletion	OSC0087	SNP array	Probe signal intensity	8
nssv18321268	deletion	OSC1264	SNP array	Probe signal intensity	5
nssv18323727	deletion	OSC1716	SNP array	Probe signal intensity	11

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18283237	Remapped	Perfect	NC_000015.10:g.(?_ 43632222)_(4369898 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,632,222	43,698,982
nssv18283407	Remapped	Perfect	NC_000015.10:g.(?_ 43632222)_(4369898 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,632,222	43,698,982
nssv18283787	Remapped	Perfect	NC_000015.10:g.(?_ 43632222)_(4369898 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,632,222	43,698,982
nssv18284063	Remapped	Perfect	NC_000015.10:g.(?_ 43632222)_(4369898 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,632,222	43,698,982
nssv18287231	Remapped	Perfect	NC_000015.10:g.(?_ 43632222)_(4369898 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,632,222	43,698,982
nssv18292844	Remapped	Perfect	NC_000015.10:g.(?_ 43632222)_(4369898 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,632,222	43,698,982
nssv18293470	Remapped	Perfect	NC_000015.10:g.(?_ 43632222)_(4369898 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,632,222	43,698,982
nssv18295242	Remapped	Perfect	NC_000015.10:g.(?_ 43632222)_(4369898 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,632,222	43,698,982
nssv18296637	Remapped	Perfect	NC_000015.10:g.(?_ 43632222)_(4369898 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,632,222	43,698,982
nssv18305810	Remapped	Perfect	NC_000015.10:g.(?_ 43632222)_(4369898 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,632,222	43,698,982
nssv18317283	Remapped	Perfect	NC_000015.10:g.(?_ 43632222)_(4369898 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,632,222	43,698,982
nssv18321268	Remapped	Perfect	NC_000015.10:g.(?_ 43632222)_(4369898 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,632,222	43,698,982
nssv18323727	Remapped	Perfect	NC_000015.10:g.(?_ 43632222)_(4369898 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,632,222	43,698,982
nssv18283237	Submitted genomic		NC_000015.9:g.(?_4 3924420)_(43991180 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,924,420	43,991,180
nssv18283407	Submitted genomic		NC_000015.9:g.(?_4 3924420)_(43991180 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,924,420	43,991,180
nssv18283787	Submitted genomic		NC_000015.9:g.(?_4 3924420)_(43991180 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,924,420	43,991,180
nssv18284063	Submitted genomic		NC_000015.9:g.(?_4 3924420)_(43991180 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,924,420	43,991,180
nssv18287231	Submitted genomic		NC_000015.9:g.(?_4 3924420)_(43991180 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,924,420	43,991,180
nssv18292844	Submitted genomic		NC_000015.9:g.(?_4 3924420)_(43991180 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,924,420	43,991,180
nssv18293470	Submitted genomic		NC_000015.9:g.(?_4 3924420)_(43991180 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,924,420	43,991,180
nssv18295242	Submitted genomic		NC_000015.9:g.(?_4 3924420)_(43991180 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,924,420	43,991,180
nssv18296637	Submitted genomic		NC_000015.9:g.(?_4 3924420)_(43991180 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,924,420	43,991,180
nssv18305810	Submitted genomic		NC_000015.9:g.(?_4 3924420)_(43991180 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,924,420	43,991,180
nssv18317283	Submitted genomic		NC_000015.9:g.(?_4 3924420)_(43991180 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,924,420	43,991,180
nssv18321268	Submitted genomic		NC_000015.9:g.(?_4 3924420)_(43991180 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,924,420	43,991,180
nssv18323727	Submitted genomic		NC_000015.9:g.(?_4 3924420)_(43991180 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,924,420	43,991,180

dbVar

Database of genomic structural variation

nsv6623113

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant