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dbVar

Database of genomic structural variation

nsv5722929

Organism: Homo sapiens

Study:nstd211 (Chuang et al. 2021)
Variant Type:mobile element insertion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:1

Description:Insertion of a SVA mobile element relative to the reference
Publication(s):Chuang et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 119 SVs from 26 studies. See in: genome view

Submitted genomic112,188,947-112,188,947

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5722929	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000011.10	Chr11	112,188,947	112,188,947
nsv5722929	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000011.9	Chr11	112,059,670	112,059,670

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17243609	sva insertion	Sequencing	Other
nssv17251545	sva insertion	Sequencing	Other

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17243609	Submitted genomic		NC_000011.10:g.112 188947_112188948in s1315	GRCh38 (hg38)		NC_000011.10	Chr11	112,188,947	112,188,947
nssv17251545	Submitted genomic		NC_000011.10:g.112 188947_112188948in s1315	GRCh38 (hg38)		NC_000011.10	Chr11	112,188,947	112,188,947
nssv17243609	Remapped	Perfect	NC_000011.9:g.1120 59670_112059671ins 1315	GRCh37.p13	First Pass	NC_000011.9	Chr11	112,059,670	112,059,670
nssv17251545	Remapped	Perfect	NC_000011.9:g.1120 59670_112059671ins 1315	GRCh37.p13	First Pass	NC_000011.9	Chr11	112,059,670	112,059,670

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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