nsv5699307
- Organism: Homo sapiens
- Study:nstd211 (Chuang et al. 2021)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Description:Insertion of a Alu mobile element relative to the reference
- Publication(s):Chuang et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 199 SVs from 25 studies. See in: genome view
Overlapping variant regions from other studies: 199 SVs from 25 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5699307 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000018.10 | Chr18 | 26,046,289 | 26,046,289 | ||
| nsv5699307 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000018.9 | Chr18 | 23,626,253 | 23,626,253 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv17200090 | alu insertion | Sequencing | Other |
| nssv17220739 | alu insertion | Sequencing | Other |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv17200090 | Submitted genomic | NC_000018.10:g.260 46289_26046290ins2 81 | GRCh38 (hg38) | NC_000018.10 | Chr18 | 26,046,289 | 26,046,289 | ||
| nssv17220739 | Submitted genomic | NC_000018.10:g.260 46289_26046290ins2 81 | GRCh38 (hg38) | NC_000018.10 | Chr18 | 26,046,289 | 26,046,289 | ||
| nssv17200090 | Remapped | Perfect | NC_000018.9:g.2362 6253_23626254ins28 1 | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 23,626,253 | 23,626,253 |
| nssv17220739 | Remapped | Perfect | NC_000018.9:g.2362 6253_23626254ins28 1 | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 23,626,253 | 23,626,253 |