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Accession: PRJNA390581 ID: 390581

marine metagenome

marine metagenome Genome sequencing and assembly

Extraction of novel alphaproteobacterial genomes from marine metagenomes to re-evaluate the phylogenetic origin of mitochondria.
AccessionPRJNA390581
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismmarine metagenome[Taxonomy ID: 408172]
unclassified sequences; metagenomes; ecological metagenomes; marine metagenome
Grants
  • "ERC Starting Grant" (Grant ID 310039-PUZZLE_CELL, European research council)
SubmissionRegistration date: 22-Feb-2018
Uppsala University
RelevanceEvolution
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)7380
WGS master45
Protein Sequences71897
Other datasets
BioSample45
Assembly45
Assembly details:
Assembly levelNumber of Assemblies
45
45
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_002937575.1ContigPTKC00000000SAMN07286230
MarineAlpha10_Bin1
GCA_002937555.1ContigPTKB00000000SAMN07286231
MarineAlpha10_Bin2
GCA_002937525.1ContigPTKA00000000SAMN07286232
MarineAlpha10_Bin3
GCA_002937455.1ContigPTJZ00000000SAMN07286233
MarineAlpha11_Bin1
GCA_002937505.1ContigPTJY00000000SAMN07286234
MarineAlpha12_Bin1
GCA_002938335.1ContigPTLO00000000SAMN07286192
MarineAlpha1_Bin1
GCA_002938125.1ContigPTLN00000000SAMN07286193
MarineAlpha2_Bin1
GCA_002938085.1ContigPTLM00000000SAMN07286194
MarineAlpha3_Bin1
GCA_002938315.1ContigPTLL00000000SAMN07286195
MarineAlpha3_Bin2
GCA_002938075.1ContigPTLK00000000SAMN07286196
MarineAlpha3_Bin3
GCA_002938045.1ContigPTLJ00000000SAMN07286197
MarineAlpha3_Bin4
GCA_002938285.1ContigPTLI00000000SAMN07286198
MarineAlpha3_Bin5
GCA_002938035.1ContigPTLH00000000SAMN07286199
MarineAlpha3_Bin6
GCA_002937995.1ContigPTLG00000000SAMN07286200
MarineAlpha3_Bin7
GCA_002938275.1ContigPTLF00000000SAMN07286201
MarineAlpha4_Bin1
GCA_002938015.1ContigPTLE00000000SAMN07286202
MarineAlpha4_Bin2
GCA_002937975.1ContigPTLD00000000SAMN07286203
MarineAlpha5_Bin1
GCA_002938175.1ContigPTKU00000000SAMN07286212
MarineAlpha5_Bin10
GCA_002937875.1ContigPTKT00000000SAMN07286213
MarineAlpha5_Bin11
GCA_002937855.1ContigPTKS00000000SAMN07286214
MarineAlpha5_Bin12
GCA_002937955.1ContigPTLC00000000SAMN07286204
MarineAlpha5_Bin2
GCA_002938255.1ContigPTLB00000000SAMN07286205
MarineAlpha5_Bin3
GCA_002938235.1ContigPTLA00000000SAMN07286206
MarineAlpha5_Bin4
GCA_002938205.1ContigPTKZ00000000SAMN07286207
MarineAlpha5_Bin5
GCA_002937925.1ContigPTKY00000000SAMN07286208
MarineAlpha5_Bin6
GCA_002938195.1ContigPTKX00000000SAMN07286209
MarineAlpha5_Bin7
GCA_002937915.1ContigPTKW00000000SAMN07286210
MarineAlpha5_Bin8
GCA_002937895.1ContigPTKV00000000SAMN07286211
MarineAlpha5_Bin9
GCA_002937825.1ContigPTKR00000000SAMN07286215
MarineAlpha6_Bin1
GCA_002937815.1ContigPTKQ00000000SAMN07286216
MarineAlpha6_Bin2
GCA_002937795.1ContigPTKP00000000SAMN07286217
MarineAlpha6_Bin3
GCA_002937775.1ContigPTKO00000000SAMN07286218
MarineAlpha6_Bin4
GCA_002938155.1ContigPTKN00000000SAMN07286219
MarineAlpha6_Bin5
GCA_002937755.1ContigPTKM00000000SAMN07286220
MarineAlpha6_Bin6
GCA_002937705.1ContigPTKL00000000SAMN07286221
MarineAlpha7_Bin1
GCA_002937725.1ContigPTKK00000000SAMN07286222
MarineAlpha8_Bin1
GCA_002937675.1ContigPTKJ00000000SAMN07286223
MarineAlpha9_Bin1
GCA_002937695.1ContigPTKI00000000SAMN07286224
MarineAlpha9_Bin2
GCA_002937655.1ContigPTKH00000000SAMN07286225
MarineAlpha9_Bin3
GCA_002937625.1ContigPTKG00000000SAMN07286226
MarineAlpha9_Bin4
GCA_002937595.1ContigPTKF00000000SAMN07286227
MarineAlpha9_Bin5
GCA_002937585.1ContigPTKE00000000SAMN07286228
MarineAlpha9_Bin6
GCA_002938115.1ContigPTKD00000000SAMN07286229
MarineAlpha9_Bin7
GCA_002937465.1ContigPTJX00000000SAMN07286235
MarineProteo1_Bin1
GCA_002937495.1ContigPTJW00000000SAMN07286236
MarineProteo1_Bin2

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