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TARA_Y100001970; TARA_20110728T1718Z_122_Combined-EVENTS_CAST_MB_D_(115 m)_GIRUS_NUC-dry_W0.22-0.45_TARA_Y100001970

Identifiers
BioSample: SAMN07286208; Sample name: Alphaproteobacteria bacterium MarineAlpha5_Bin6
Organism
Alphaproteobacteria bacterium MarineAlpha5_Bin6
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; unclassified Alphaproteobacteria
Package
Microbe; version 1.0
Attributes
isolation sourcesaline water including plankton
collection date2011-07-28
geographic locationPacific Ocean: South Pacific Ocean
latitude and longitude9.0063 S 139.1394 W
isolateMarineAlpha5_Bin6
depth115 m
sample typemetagenomic assembly
metagenome sourcemarine metagenome
temperature24.69625
broad-scale environmental contextmarine biome (ENVO:00000447)
collected byTara Oceans
noteThis BioSample is a metagenomic assembly obtained from the marine metagenome BioSample: SAMEA2622695.
environmental_sampleTRUE
metagenomicTRUE
Description

This sample (TARA_Y100001970) was collected during the Tara Oceans expedition (2009-2013) at station TARA_122 (latitudeN=-9.0063, longitudeE=-139.1394) on date/time=2011-07-28T17:15:56, using a ROSETTE sampler with CTD (sbe9C) and 10 Niskin bottles. The sample material (saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)) was collected at a depth of 115-115 m, targeting a deep chlorophyll maximum layer (ENVO:xxxxxxxx) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.22-0.45 micrometres), and stored at -20 degC for later detection of large DNA virus nucleic acid sequences by pyrosequencing methods, and for later metagenomics analysis.

BioProject
PRJNA390581 marine metagenome
Retrieve all samples from this project

Submission
Uppsala University, Joran Martijn; 2017-06-28
Accession:
SAMN07286208
ID:
7286208

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