TARA_Y100000590; TARA_20110808T1733Z_125_EVENT_PUM... - BioSample

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Identifiers: BioSample: SAMN07286217; Sample name: Alphaproteobacteria bacterium MarineAlpha6_Bin3

Organism: Alphaproteobacteria bacterium MarineAlpha6_Bin3
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; unclassified Alphaproteobacteria

Attributes

isolation source	saline water including plankton
collection date	2011-08-08
geographic location	Pacific Ocean: South Pacific Ocean
latitude and longitude	8.9111 N 142.5571 E
isolate	MarineAlpha6_Bin3
depth	5 m
sample type	metagenomic assembly
metagenome source	marine metagenome
temperature	26.780158
broad-scale environmental context	marine biome (ENVO:00000447)
collected by	Tara Oceans
note	This BioSample is a metagenomic assembly obtained from the marine metagenome BioSample: SAMEA2622822.
environmental_sample	TRUE
metagenomic	TRUE

Description: This sample (TARA_Y100000590) was collected during the Tara Oceans expedition (2009-2013) at station TARA_125 (latitudeN=-8.9111, longitudeE=-142.5571) on date/time=2011-08-08T17:33, using a PUMP (High Volume Peristaltic Pump). The sample material (saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)) was collected at a depth of 3-7 m, targeting a surface water layer (ENVO:00002042) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.22-0.45 micrometres), and stored at -20 degC for later detection of large DNA virus nucleic acid sequences by pyrosequencing methods, and for later metagenomics analysis.