Total lengths are calculated by summing the length of the sequenced bases and estimated gaps.
Chromosome
All scaffolds
Placed scaffolds
Unplaced scaffolds
1
59,578,282
59,578,282
0
2
59,640,629
59,640,629
0
3
62,628,489
62,628,489
0
4
78,093,715
78,093,715
0
5
72,500,376
72,500,376
0
6
60,270,059
60,270,059
0
7
74,282,399
74,282,399
0
8
54,304,671
54,304,671
0
9
56,459,846
56,459,846
0
10
45,420,867
45,420,867
0
11
45,484,837
45,484,837
0
12
49,182,954
49,182,954
0
13
52,186,027
52,186,027
0
14
52,660,232
52,660,232
0
15
48,040,578
48,040,578
0
16
55,266,484
55,266,484
0
17
53,461,100
53,461,100
0
18
51,023,478
51,023,478
0
19
48,449,771
48,449,771
0
20
55,201,332
55,201,332
0
21
45,934,066
45,934,066
0
22
39,133,080
39,133,080
0
23
46,223,584
46,223,584
0
24
42,172,926
42,172,926
0
25
37,502,051
37,502,051
0
Un
28,352,955
na
28,352,955
Genome
1,373,454,788
1,345,101,833
28,352,955
N50 is a measure of contiguity. 50% of the bases reside in a scaffold of this length or greater.
Chromosome
All scaffolds
Placed scaffolds
Unplaced scaffolds
1
4,818,344
4,818,344
0
2
5,197,540
5,197,540
0
3
4,572,487
4,572,487
0
4
7,379,053
7,379,053
0
5
13,500,411
13,500,411
0
6
9,977,335
9,977,335
0
7
5,009,329
5,009,329
0
8
8,083,138
8,083,138
0
9
32,000,149
32,000,149
0
10
4,706,895
4,706,895
0
11
7,242,237
7,242,237
0
12
32,399,083
32,399,083
0
13
8,482,599
8,482,599
0
14
28,653,342
28,653,342
0
15
29,777,154
29,777,154
0
16
14,334,442
14,334,442
0
17
5,946,312
5,946,312
0
18
15,551,655
15,551,655
0
19
11,329,993
11,329,993
0
20
9,260,504
9,260,504
0
21
4,066,630
4,066,630
0
22
5,145,648
5,145,648
0
23
3,380,090
3,380,090
0
24
4,737,936
4,737,936
0
25
4,876,667
4,876,667
0
Un
48,672
na
48,672
Genome
7,379,053
7,538,642
48,672
Ungapped lengths are calculated by summing the length of sequenced bases only. 'Ns' are excluded.
Chromosome
All scaffolds
Placed scaffolds
Unplaced scaffolds
1
59,518,204
59,518,204
0
2
59,561,129
59,561,129
0
3
62,565,097
62,565,097
0
4
75,268,643
75,268,643
0
5
72,411,310
72,411,310
0
6
60,194,477
60,194,477
0
7
74,193,585
74,193,585
0
8
54,255,784
54,255,784
0
9
56,393,308
56,393,308
0
10
45,373,267
45,373,267
0
11
45,418,283
45,418,283
0
12
49,092,027
49,092,027
0
13
52,124,602
52,124,602
0
14
52,604,632
52,604,632
0
15
47,971,581
47,971,581
0
16
55,207,672
55,207,672
0
17
53,387,590
53,387,590
0
18
50,931,061
50,931,061
0
19
48,391,784
48,391,784
0
20
55,132,661
55,132,661
0
21
45,869,123
45,869,123
0
22
39,045,925
39,045,925
0
23
46,157,041
46,157,041
0
24
42,107,172
42,107,172
0
25
37,439,205
37,439,205
0
Un
28,150,343
na
28,150,343
Genome
1,368,765,506
1,340,615,163
28,150,343
Spanned gaps are found within scaffolds and there is some evidence suggesting linkage
between the two sequences flanking the gap. Unspanned gaps are found between scaffolds and
there is no evidence of linkage.