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Sample GSM9842 Query DataSets for GSM9842
Status Public on Aug 06, 2004
Title nl158
Sample type RNA
 
Source name primary acute lymphoblastic leukemia cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:55, Count:32
Corner- Avg:5854, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:18.367582,SFGene:All
Background:Avg:47.30,Stdev:1.27,Max:50.0,Min:44.2
Noise:Avg:1.69,Stdev:0.10,Max:2.0,Min:1.5
RawQ:1.99
Keywords = ALL
Lot batch =
 
Submission date Sep 06, 2003
Last update date May 28, 2005
Contact name William E Evans
E-mail(s) william.evans@stjude.org
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL96
Series (6)
GSE635 Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE646 PRED sensitive all ALL
GSE649 VCR resistant all ALL

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF VALUE DETECTION P-VALUE
1007_s_at 604.2 0.004863
1053_at 213.4 0.117160
117_at 323.0 0.138765
121_at 1375.5 0.001354
1255_g_at 144.1 0.320830
1294_at 818.7 0.001354
1316_at 248.5 0.081337
1320_at 189.0 0.234557
1405_i_at 238.4 0.254899
1431_at 108.7 0.138765
1438_at 452.7 0.014937
1487_at 486.1 0.175989
1494_f_at 282.5 0.089405
1598_g_at 648.9 0.138765
160020_at 700.0 0.024711
1729_at 66.9 0.479380
1773_at 294.6 0.162935
177_at 139.0 0.218983
179_at 1216.3 0.054470
1861_at 240.9 0.204022

Total number of rows: 22283

Table truncated, full table size 560 Kbytes.




Supplementary file Size Download File type/resource
GSM9842.CEL.gz 3.2 Mb (ftp)(http) CEL

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