|
| Status |
Public on Jun 04, 2013 |
| Title |
sem1-del-1-b |
| Sample type |
RNA |
| |
|
| Channel 1 |
| Source name |
sem1-del
|
| Organism |
Saccharomyces cerevisiae |
| Characteristics |
strain: BY4742
genotype: sem1-del
|
| Growth protocol |
yeast-deleteome[grow]
|
| Extracted molecule |
total RNA |
| Extraction protocol |
yeast RNA isolation for robotic amplification v1.0
|
| Label |
Cy5
|
| Label protocol |
robot amplification and labeling v1.0
|
| |
|
| Channel 2 |
| Source name |
refpool
|
| Organism |
Saccharomyces cerevisiae |
| Characteristics |
strain: BY4742
genotype: wild type
|
| Growth protocol |
yeast-deleteome[grow]
|
| Extracted molecule |
total RNA |
| Extraction protocol |
yeast RNA isolation for robotic amplification v1.0
|
| Label |
Cy3
|
| Label protocol |
robot amplification and labeling v1.0
|
| |
|
| |
| Hybridization protocol |
Tecan HS4800 hybridization
|
| Scan protocol |
scanning of slides using Agilent G256BA
Imagene feature extraction
|
| Data processing |
genes, no bg corr, dye corr
limma
|
| |
|
| Submission date |
Aug 03, 2012 |
| Last update date |
Jun 04, 2013 |
| Contact name |
Patrick Kemmeren |
| Organization name |
UMC Utrecht
|
| Department |
Department of Molecular Cancer Research
|
| Lab |
Holstege Lab
|
| Street address |
Universiteitsweg 100
|
| City |
Utrecht |
| State/province |
Utrecht |
| ZIP/Postal code |
3584 CG |
| Country |
Netherlands |
| |
|
| Platform ID |
GPL11232 |
| Series (1) |
| GSE39861 |
Gene deletion expression profiles of SAGA, TREX2 and Sem1 |
|
