NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM9778 Query DataSets for GSM9778
Status Public on Aug 06, 2004
Title nl094
Sample type RNA
 
Source name primary acute lymphoblastic leukemia cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:58, Count:32
Corner- Avg:4398, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:51.419022,SFGene:All
Background:Avg:43.11,Stdev:0.65,Max:45.0,Min:41.5
Noise:Avg:1.41,Stdev:0.04,Max:1.6,Min:1.3
RawQ:1.94
Keywords = ALL
Lot batch =
 
Submission date Sep 06, 2003
Last update date May 28, 2005
Contact name William E Evans
E-mail(s) william.evans@stjude.org
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL96
Series (8)
GSE635 Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE647 PRED resistant all ALL
GSE648 VCR sensitive all ALL

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF VALUE DETECTION P-VALUE
1007_s_at 626.6 0.162935
1053_at 623.4 0.016986
117_at 220.3 0.250724
121_at 1455.6 0.004863
1255_g_at 198.5 0.175989
1294_at 1112.4 0.007543
1316_at 215.3 0.218983
1320_at 144.9 0.641310
1405_i_at 14.1 0.997857
1431_at 37.0 0.882840
1438_at 259.4 0.267463
1487_at 640.9 0.189687
1494_f_at 191.7 0.358690
1598_g_at 1129.4 0.267463
160020_at 1089.1 0.014937
1729_at 65.8 0.882840
1773_at 471.7 0.060419
177_at 232.8 0.602006
179_at 1824.5 0.081337
1861_at 497.0 0.066865

Total number of rows: 22283

Table truncated, full table size 560 Kbytes.




Supplementary file Size Download File type/resource
GSM9778.CEL.gz 2.9 Mb (ftp)(http) CEL

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap