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Sample GSM97641 Query DataSets for GSM97641
Status Public on Apr 29, 2009
Title pneumococcal stimulated PBMC from control #3
Sample type RNA
 
Source name pneumococcal stimulated PBMC from control
Organism Homo sapiens
Characteristics pneumococcal stimulated PBMC from control patient #3
Biomaterial provider A. Vambutas
Treatment protocol 16 hour culture with 100ul 23 valent pneumococcal antigen stimulation
Extracted molecule total RNA
Extraction protocol affinity spin column
Label biotin
Label protocol Enzo protocol
 
Hybridization protocol Affymetrix protocol to HG-U133A 2.0
Description control patient #3 PBMC stimulated with pneumococcal antigen
Data processing Affymetrix
 
Submission date Feb 20, 2006
Last update date Apr 24, 2009
Contact name Andrea Vambutas
E-mail(s) vambutas@lij.edu
Phone 718-470-7955
Fax 718-470-4281
Organization name Long Island Jewish Medical Center
Department Otolaryngology
Street address 430 Lakeville Road
City New Hyde Park
State/province NY
ZIP/Postal code 11042
Country USA
 
Platform ID GPL571
Series (1)
GSE4277 IL1R2 and glucocorticoid responsiveness in patients with AIED

Data table header descriptions
ID_REF
VALUE VALUE OF PNEUMOCOCCAL STIMULATED PBMC CONTROL #3
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 3046.5 P 0.000446
AFFX-BioB-M_at 3832.1 P 0.000044
AFFX-BioB-3_at 2740.1 P 0.000044
AFFX-BioC-5_at 7843.1 P 0.000052
AFFX-BioC-3_at 11381.5 P 0.000044
AFFX-BioDn-5_at 15542.4 P 0.000044
AFFX-BioDn-3_at 45801.2 P 0.000044
AFFX-CreX-5_at 119796.2 P 0.000052
AFFX-CreX-3_at 140858.9 P 0.000044
AFFX-DapX-5_at 135 A 0.195246
AFFX-DapX-M_at 48.4 A 0.58862
AFFX-DapX-3_at 28.9 A 0.41135
AFFX-LysX-5_at 79 A 0.411373
AFFX-LysX-M_at 21.4 A 0.916408
AFFX-LysX-3_at 60.3 A 0.313723
AFFX-PheX-5_at 16.2 A 0.860518
AFFX-PheX-M_at 20.9 A 0.814869
AFFX-PheX-3_at 120.2 A 0.354441
AFFX-ThrX-5_at 32 A 0.834139
AFFX-ThrX-M_at 62.5 A 0.617401

Total number of rows: 22277

Table truncated, full table size 602 Kbytes.




Supplementary data files not provided

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