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Sample GSM97638 Query DataSets for GSM97638
Status Public on Apr 29, 2009
Title pneumococcal stimulated PBMC of control patient #1
Sample type RNA
 
Source name pneumococcal stimulated PBMC of control patient
Organism Homo sapiens
Characteristics pneumococcal stimulated PBMC from control patient #1
Biomaterial provider A. Vambutas
Treatment protocol 16 hour culture with 100ul 23 valent pneumococcal antigen stimulation
Extracted molecule total RNA
Extraction protocol affinity spin column
Label biotin
Label protocol Enzo protocol
 
Hybridization protocol Affymetrix protocol to HG-U133A 2.0
Description control patient #1 PBMC stimulated with pneumococcal antigen
Data processing Affymetrix
 
Submission date Feb 20, 2006
Last update date Apr 24, 2009
Contact name Andrea Vambutas
E-mail(s) vambutas@lij.edu
Phone 718-470-7955
Fax 718-470-4281
Organization name Long Island Jewish Medical Center
Department Otolaryngology
Street address 430 Lakeville Road
City New Hyde Park
State/province NY
ZIP/Postal code 11042
Country USA
 
Platform ID GPL571
Series (1)
GSE4277 IL1R2 and glucocorticoid responsiveness in patients with AIED

Data table header descriptions
ID_REF
VALUE VALUE OF PNEUMOCOCCAL STIMULATED PBMC, CONTROL #1
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 4410.7 P 0.000446
AFFX-BioB-M_at 5707.2 P 0.000044
AFFX-BioB-3_at 3218.1 P 0.00007
AFFX-BioC-5_at 11424.8 P 0.000052
AFFX-BioC-3_at 15257.4 P 0.000044
AFFX-BioDn-5_at 25249.9 P 0.000044
AFFX-BioDn-3_at 71159.3 P 0.000052
AFFX-CreX-5_at 130424.8 P 0.000052
AFFX-CreX-3_at 161386.4 P 0.000044
AFFX-DapX-5_at 66.3 A 0.617401
AFFX-DapX-M_at 143.7 A 0.48511
AFFX-DapX-3_at 307.8 A 0.340661
AFFX-LysX-5_at 120.8 A 0.5
AFFX-LysX-M_at 25.2 A 0.969024
AFFX-LysX-3_at 265.8 A 0.067678
AFFX-PheX-5_at 27.9 A 0.883887
AFFX-PheX-M_at 27.2 A 0.883887
AFFX-PheX-3_at 354 A 0.382599
AFFX-ThrX-5_at 26.3 A 0.937071
AFFX-ThrX-M_at 186.7 A 0.470241

Total number of rows: 22277

Table truncated, full table size 603 Kbytes.




Supplementary data files not provided

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