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Sample GSM97629 Query DataSets for GSM97629
Status Public on Apr 29, 2009
Title pneumococcal stimulated PBMC, AIED patient #2
Sample type RNA
 
Source name pneumococcal stimulated PBMC, AIED patient
Organism Homo sapiens
Characteristics AIED patient #2 PBMC stimulated with pneumococcal antigen
Biomaterial provider A. Vambutas
Treatment protocol 16 hour culture with stimulation with 1ooul of 23 valent pneumococcal antigen
Extracted molecule total RNA
Extraction protocol affinity spin column
Label biotin
Label protocol Enzo protocol
 
Hybridization protocol Affymetrix protocol to HG-U133A 2.0
Description AIED patient 2 PBMC stimulated with pneumococcal antigen
Data processing Affymetrix
 
Submission date Feb 20, 2006
Last update date Apr 24, 2009
Contact name Andrea Vambutas
E-mail(s) vambutas@lij.edu
Phone 718-470-7955
Fax 718-470-4281
Organization name Long Island Jewish Medical Center
Department Otolaryngology
Street address 430 Lakeville Road
City New Hyde Park
State/province NY
ZIP/Postal code 11042
Country USA
 
Platform ID GPL571
Series (1)
GSE4277 IL1R2 and glucocorticoid responsiveness in patients with AIED

Data table header descriptions
ID_REF
VALUE VALUE OF PBMC STIMULATED WITH PNEUMOCOCCAL ANTIGEN AIED PATIENT #2
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 2789 P 0.00039
AFFX-BioB-M_at 3695.9 P 0.000052
AFFX-BioB-3_at 2027.4 P 0.000044
AFFX-BioC-5_at 8012.8 P 0.000052
AFFX-BioC-3_at 10260.5 P 0.000044
AFFX-BioDn-5_at 17536.8 P 0.000044
AFFX-BioDn-3_at 46539.3 P 0.000044
AFFX-CreX-5_at 87199.8 P 0.000052
AFFX-CreX-3_at 107379.2 P 0.000044
AFFX-DapX-5_at 185.3 A 0.165861
AFFX-DapX-M_at 49.3 A 0.783476
AFFX-DapX-3_at 10.8 A 0.995002
AFFX-LysX-5_at 13.2 A 0.90441
AFFX-LysX-M_at 53.2 A 0.824672
AFFX-LysX-3_at 203.8 A 0.165861
AFFX-PheX-5_at 151.5 A 0.425962
AFFX-PheX-M_at 169.5 A 0.382599
AFFX-PheX-3_at 74.5 A 0.672921
AFFX-ThrX-5_at 15.9 A 0.966323
AFFX-ThrX-M_at 41.5 A 0.772364

Total number of rows: 22277

Table truncated, full table size 602 Kbytes.




Supplementary data files not provided

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