NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM9743 Query DataSets for GSM9743
Status Public on Aug 06, 2004
Title nl059
Sample type RNA
 
Source name primary acute lymphoblastic leukemia cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:143, Count:32
Corner- Avg:6052, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:30.286009,SFGene:All
Background:Avg:45.47,Stdev:0.74,Max:46.7,Min:43.4
Noise:Avg:1.50,Stdev:0.04,Max:1.7,Min:1.4
RawQ:1.96
Keywords = ALL
Lot batch =
 
Submission date Sep 05, 2003
Last update date May 28, 2005
Contact name William E Evans
E-mail(s) william.evans@stjude.org
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL96
Series (10)
GSE635 Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE643 ASP sensitive all ALL
GSE646 PRED sensitive all ALL

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF VALUE DETECTION P-VALUE
1007_s_at 1005.2 0.002617
1053_at 143.9 0.397994
117_at 303.6 0.031336
121_at 1424.7 0.005643
1255_g_at 24.5 0.621816
1294_at 1120.4 0.001354
1316_at 313.6 0.117160
1320_at 160.5 0.500000
1405_i_at 82.4 0.801637
1431_at 164.6 0.043968
1438_at 162.3 0.218983
1487_at 647.3 0.250724
1494_f_at 278.3 0.117160
1598_g_at 728.0 0.218983
160020_at 696.7 0.014937
1729_at 48.3 0.765443
1773_at 156.9 0.218983
177_at 101.0 0.660442
179_at 894.7 0.175989
1861_at 468.9 0.006532

Total number of rows: 22283

Table truncated, full table size 560 Kbytes.




Supplementary file Size Download File type/resource
GSM9743.CEL.gz 3.1 Mb (ftp)(http) CEL

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap