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Sample GSM949288 Query DataSets for GSM949288
Status Public on Oct 03, 2012
Title Subject 73 Treg treated CD8 T cells at 8 hour rep1
Sample type RNA
 
Source name Subject 73 Treg treated CD8 T cells at 8 hour
Organism Homo sapiens
Characteristics cell type: Naïve T cells
subject: 73
treatment: Treg treated
time: 8 hour
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label Biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description CD8_73_T8
Data processing The data were normalised using quantile normalisation with Partek Genomics Suite
 
Submission date Jun 17, 2012
Last update date Oct 03, 2012
Contact name Guangyong Peng
E-mail(s) gpeng@slu.edu
Phone 314-977-9064
Organization name Saint Louis University
Department Internal Medicine
Street address 1100 S Grand Blvd.
City St. Louis
State/province MO
ZIP/Postal code 63104
Country USA
 
Platform ID GPL13369
Series (1)
GSE38765 Human regulatory T cells induce lymphocyte senescence

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection_Pval

Data table
ID_REF VALUE Detection_Pval
ILMN_1762337 3.0677 0.38961
ILMN_2055271 24.931 0.045455
ILMN_1736007 4.9549 0.33377
ILMN_2383229 0.98596 0.45714
ILMN_1806310 -2.9328 0.6013
ILMN_1779670 -7.0093 0.6974
ILMN_1653355 19.871 0.087013
ILMN_1717783 -14.613 0.84026
ILMN_1705025 17.193 0.10909
ILMN_1814316 10.405 0.2013
ILMN_2359168 -14.825 0.84156
ILMN_1731507 -22.594 0.94545
ILMN_1787689 12.684 0.16753
ILMN_3241953 153.85 0
ILMN_1745607 -28.626 0.98961
ILMN_2136495 -15.396 0.84545
ILMN_1668111 -2.857 0.5961
ILMN_2295559 0.034185 0.4961
ILMN_1735045 -16.536 0.86494
ILMN_1680754 17.914 0.1039

Total number of rows: 47228

Table truncated, full table size 1243 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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