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GEO accession:
Sample GSM936089
Query DataSets for GSM936089
Status
Public on May 24, 2012
Title
Broad_Combined_HUVEC
Sample type
SRA
Source name
HUVEC
Organism
Homo sapiens
Characteristics
lab: Broad
lab description: Bernstein - Broad Institute
datatype: Combined
datatype description: Multi-assay Synthesis
cell: HUVEC
cell organism: human
cell description: umbilical vein endothelial cells
cell karyotype: normal
cell lineage: mesoderm
cell sex: U
softwareversion: ChromHMM_ENCODEDynamicsPaper
Biomaterial provider
Lonza
Growth protocol
HUVEC_protocol.pdf
Extracted molecule
genomic DNA
Extraction protocol
Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see
http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHmm
Library strategy
ChIP-Seq
Library source
genomic
Library selection
ChIP
Instrument model
Illumina Genome Analyzer
Data processing
http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHmm
Submission date
May 23, 2012
Last update date
May 15, 2019
Contact name
ENCODE DCC
E-mail(s)
encode-help@lists.stanford.edu
Organization name
ENCODE DCC
Street address
300 Pasteur Dr
City
Stanford
State/province
CA
ZIP/Postal code
94305-5120
Country
USA
Platform ID
GPL9052
Series (1)
GSE38163
Chromatin State Segmentation by HMM from ENCODE/Broad
Relations
Reanalysis of
GSM733640
Reanalysis of
GSM733673
Reanalysis of
GSM733683
Reanalysis of
GSM733688
Reanalysis of
GSM733690
Reanalysis of
GSM733691
Reanalysis of
GSM733703
Reanalysis of
GSM733715
Reanalysis of
GSM733716
Reanalysis of
GSM733735
Reanalysis of
GSM733749
Reanalysis of
GSM733757
BioSample
SAMN02197541
Named Annotation
GSM936089_hg19_wgEncodeBroadHmmHuvecHMM.bed.gz
SRA
SRX067391
SRA
SRX067424
SRA
SRX067434
SRA
SRX067439
SRA
SRX067441
SRA
SRX067442
SRA
SRX067454
SRA
SRX067466
SRA
SRX067467
SRA
SRX067486
SRA
SRX067500
SRA
SRX067508
Supplementary file
Size
Download
File type/resource
GSM936089_hg19_wgEncodeBroadHmmHuvecHMM.bed.gz
5.1 Mb
(ftp)
(http)
BED
SRA Run Selector
Raw data are available in SRA
Processed data provided as supplementary file
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