|
| Status |
Public on Dec 05, 2012 |
| Title |
786_O_pGIPZ_1 |
| Sample type |
RNA |
| |
|
| Source name |
786_O_pGIPZ
|
| Organism |
Homo sapiens |
| Characteristics |
cell line: 786-O renal cell carcinoma cell line
tranduced with: pGIPZ control vector
|
| Growth protocol |
Standard tissue culture conditions.
|
| Extracted molecule |
total RNA |
| Extraction protocol |
PrepEase RNA spin kit (USB)
|
| Label |
biotin
|
| Label protocol |
Standard Affymetrix protocol
|
| |
|
| Hybridization protocol |
Standard Affymetrix protocol
|
| Scan protocol |
Standard Affymetrix protocol
|
| Description |
786-O cells transduced with pGIPZ control vector
|
| Data processing |
GCRMA as implemented in the R-package gcrma using the default settings and the custom Brain Array CDF-file hs133phsentrezgcdf version 10 (http://brainarray.mbni.med.umich.edu/).
|
| |
|
| Submission date |
Jan 30, 2012 |
| Last update date |
Dec 05, 2012 |
| Contact name |
Sakari Vanharanta |
| E-mail(s) |
sakari.vanharanta@helsinki.fi
|
| Organization name |
University of Helsinki
|
| Department |
Translational Cancer Medicine Program
|
| Lab |
Vanharanta
|
| Street address |
Haartmaninkatu 8
|
| City |
Helsinki |
| ZIP/Postal code |
00014 |
| Country |
Finland |
| |
|
| Platform ID |
GPL6791 |
| Series (2) |
| GSE32299 |
Epigenetic expansion of VHL-HIF signal output drives multiorgan metastasis in renal cancer |
| GSE35417 |
Gene expression changes in 786-O cells in response to SUZ12 knockdown. |
|
