|
| Status |
Public on Dec 05, 2012 |
| Title |
786M1A-HA-VHL-2 |
| Sample type |
RNA |
| |
|
| Source name |
786-M1A-HA-VHL
|
| Organism |
Homo sapiens |
| Characteristics |
cell line: 786-M1A cell line (metastatic)
protocol: HA-VHL reintroduced
|
| Growth protocol |
Standard tissue culture conditions.
|
| Extracted molecule |
total RNA |
| Extraction protocol |
PrepEase RNA spin kit (USB)
|
| Label |
biotin
|
| Label protocol |
Standard Affymetrix protocol.
|
| |
|
| Hybridization protocol |
Standard Affymetrix protocol.
|
| Scan protocol |
Standard Affymetrix protocol.
|
| Description |
786-M1A cells expressing HA-VHL
786M1A_HA_VHL_2_HG-U133_Plus_2.CEL
|
| Data processing |
GCRMA as implemented in the R-package gcrma using the default settings and the custom CDF-file hs133phsentrezgcdf version 10.
|
| |
|
| Submission date |
Sep 22, 2011 |
| Last update date |
Dec 05, 2012 |
| Contact name |
Sakari Vanharanta |
| E-mail(s) |
sakari.vanharanta@helsinki.fi
|
| Organization name |
University of Helsinki
|
| Department |
Translational Cancer Medicine Program
|
| Lab |
Vanharanta
|
| Street address |
Haartmaninkatu 8
|
| City |
Helsinki |
| ZIP/Postal code |
00014 |
| Country |
Finland |
| |
|
| Platform ID |
GPL6791 |
| Series (2) |
| GSE32297 |
Gene expression changes in response to VHL-reintroduction in metastatic 786-M1A cells. |
| GSE32299 |
Epigenetic expansion of VHL-HIF signal output drives multiorgan metastasis in renal cancer |
|
